Xenopus tropicalis (tropical clawed frog): 108644826
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Entry
108644826 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108644826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108644826
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108644826
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
HVO_2753_ZBP
zf-met
Motif
Other DBs
NCBI-GeneID:
108644826
NCBI-ProteinID:
XP_031759808
UniProt:
A0A8J1JPK3
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All DBs
Position
6:3223387..3229319
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AA seq
564 aa
AA seq
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MLEQSALPGLHPEEGHGILSLVPQKPFVCTECGRGFSHRGKLSVHLQIHTGEKPFVCTEC
GESFSHRGKLSVHLRIHTGEKPFVCTECGRGFSHRGKLSVHLQIHTGEKPFVCTECGESF
SHRGKLSVHLRIHAGEKPFVCTECGESFSHRGKLNVHLRIHTGEKPFVCTECGESFSHRG
KLSVHLHIHTGEKPFVCTECGESFSHRGKLSVHLRIHTGEKPFVCTECGRGFSHRGEKPF
VCTECGRGFRHKATLEEHLGAHKDLRPHVCTECGKTYKYRGGLNAHCRSHTRVKPYVCSE
CGKILSCKSSLTIHLRYHTGETFPCTECDKSFRQKINLKRHQMIHTGEKPFECTECGKRF
REKRKMELHRLIHSGVKPFVCLECGQQFRWKQALQYHQLGHTGERPYECSECGKGFRSSG
ELGAHVRGHTGEKPFICTECGKRYQGARRLKASDSHQSREVCLYRVGQRLERKISKLILS
LIHDRITFSTLREESLTNVGQIRMFCPESKKLKDINFAPQFSDVSSPIRAIYHACPTECN
KGILSYGELWGKRPVGSLLGSLLC
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgttagagcagagcgctctgcctgggcttcatcctgaggagggacatggaatattgtct
ctagtcccacagaaaccctttgtctgtactgagtgtgggaggggcttcagccataggggt
aaactcagtgtccatcttcaaattcatacgggggagaaaccatttgtctgcactgagtgt
ggggaaagcttcagccataggggtaaactcagtgtccatcttcgcattcatacgggggag
aaaccctttgtctgtactgagtgtgggaggggcttcagccataggggtaaactcagtgtc
catcttcaaattcatacgggggagaaaccatttgtctgcactgagtgtggggaaagcttc
agccataggggtaaactcagtgtccatcttcgcattcatgcaggggagaaaccctttgtc
tgtactgagtgtggggaaagcttcagccataggggtaaactcaatgtccatcttcgcatt
catacgggggagaaaccctttgtctgtactgagtgtggggaaagcttcagccataggggt
aaactcagtgtccatcttcacattcatacgggggagaaaccatttgtctgcactgagtgt
ggggaaagcttcagccataggggtaaactcagtgtccatcttcgcattcatacgggggag
aaaccctttgtctgtactgagtgtgggaggggcttcagccataggggggagaaacccttt
gtctgtactgagtgtgggaggggcttcagacacaaggcaaccctggaagagcaccttggg
gcccacaaagatctgcgaccccatgtctgtactgagtgtgggaaaacatacaaatacaga
ggaggactaaatgcccattgtcgcagtcacactcgagtgaagccttatgtctgcagtgag
tgtgggaaaatccttagctgtaagtcttcactcactattcatcttagatatcacacaggt
gagactttcccttgcacggagtgtgataaatcctttagacaaaagataaacctaaaaagg
caccaaatgatccacacgggggagaaaccatttgagtgcacagagtgcgggaaacgcttc
cgggaaaaaagaaaaatggagttacatcgactcattcattctggggtgaaaccttttgtg
tgtttggagtgcggccaacagttcagatggaaacaagcacttcaatatcaccagttaggt
cacaccggggagcggccgtatgagtgtagtgagtgtgggaaaggctttaggtctagtggt
gaacttggagcacatgttcggggccacacaggggagaaaccatttatctgtactgagtgt
gggaaaaggtaccagggggcacgtaggctcaaggcttcagactcacatcagagtagggaa
gtctgtttgtaccgagtggggcaacggctggaaagaaagatctcaaaactcatcctctca
ctcatacacgatagaattacgttttctactctgcgagaggaaagtttgacaaatgttgga
caaataagaatgttctgtcccgagtccaaaaagctgaaggatatcaattttgcaccgcaa
ttcagcgacgtttcgagcccaattagagccatttatcacgcttgccctacagagtgcaat
aaaggcatcttatcatacggggaattgtggggcaagaggccggtgggttcgctgctggga
agcttgttgtgctga
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