Xenopus tropicalis (tropical clawed frog): 108645295
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Entry
108645295 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF8.4
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108645295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108645295
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108645295
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
C2CH-3rd_BIRD-IDD
KRAB
zf-C2HE
zf-MYST
Motif
Other DBs
NCBI-GeneID:
108645295
NCBI-ProteinID:
XP_031757810
UniProt:
A0A803J8P8
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Position
5:complement(162475780..162485421)
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AA seq
587 aa
AA seq
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MGISQEPTDPVMGNQDPDLLHQRILSLTLEIIYLLTGEGYTVTKKSGDGAPPQTCTDCML
GGACRHHVTPTVGALHAPGSALQKENAKRILELISNIIQLLTGEVAIRCEDVSLYFSLEE
WQYLKGNQTRYREVIKENRQQLRPLGCAHGDGSASKPAVGADLCNAKEPDKTGAEEGDPP
NPDIAPTDPQTATNCFSHGIKEEPTSWEEYSDWKIDSLTDTGGSGPIGSLSAHNGPNGIK
KEAAPWEHGKCSNRNIKPLLDQIPGSEPLTDNMRSSLNNSLSAGYGSQRIKEEPDSWEVY
SDWTMSSLTEPVQADAAHRKGPSVCSSLSEHSGSNGETASWVSLSVNSLSGCTEGEPIPQ
KVGGASDPKCNPTGTPRTAPPIPIIGPSPKQQDGIRILTSTQPGAPKPKVIYTCSACGKP
FTSRKHCERHQRVHTRETTFPCAECGKCFTQRSHLTAHSRMHSGDNSFTCAECGKCFLFQ
SDLNRHVITHTGEKPFSCAQCGKHFGHLYSLKRHLVIHSGNKPFPCPQCGKCYWHQGDLN
RHIVTHSGQKPFSCAQCGKCFWVQRDLSRHVRGHTDPIPAPGENYVY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctcccaggaacccactgacccagtgatggggaaccaggatccagatctgctg
catcagagaatcctgagtctcacactggagattatctacctgctgactggggagggctac
actgttacaaagaagtcaggtgatggcgcccccccacagacctgcactgactgtatgttg
ggaggagcctgcaggcaccatgtgaccccaactgtgggggccctgcatgcccctggctcc
gccctacagaaggaaaatgccaagaggatcctggaactcatctccaacatcatccagctg
ctgactggagaggttgccataaggtgtgaggacgtctccctctatttctccttggaggag
tggcagtatttaaaggggaaccaaacccgatacagggaagtgataaaggagaaccggcag
cagctccgcccactgggctgtgcccatggagatggcagtgccagtaaacctgctgtgggg
gcagatctgtgcaatgcaaaggaaccagacaagactggggcagaagaaggagacccccca
aaccctgacattgccccaactgatccccaaacagcgaccaactgcttctctcatgggatt
aaagaggagcctacttcatgggaggagtattctgattggaagattgattccctcactgac
accgggggatccggcccgattggcagcctctcagcacacaatggcccaaatgggattaaa
aaggaagcggctccctgggaacacggaaaatgctcaaaccggaatattaagccacttttg
gatcagatcccgggatcagaaccactgactgataacatgagatccagcctaaataacagc
ctgtcggcagggtatggatcacagaggattaaagaggaaccagattcatgggaagtttat
tctgattggaccatgagttcccttacagaaccggtacaggcagatgcagcccatagaaag
ggacccagtgtctgtagcagcttgtcagaacattctgggtctaatggggaaacagcttca
tgggttagcttgtcagtaaatagcctatccggttgtactgagggggaaccaataccccag
aaagtgggtggagcttcagatcccaagtgtaatcccaccggaacccccagaactgccccc
cccatccctattattgggcccagcccaaagcagcaagatggcatcaggatcctgactagc
acccagccgggggcccccaagcccaaggtgatctacacgtgcagcgcctgcgggaagcca
ttcaccagcaggaagcactgtgagcggcaccagagggtccacacgcgagagaccaccttt
ccctgcgctgaatgcggcaaatgcttcactcagcggtcgcatctaacggcgcattcccga
atgcacagcggcgacaattccttcacttgcgccgaatgcggcaaatgcttcttgttccag
agcgacctcaaccggcacgtaatcacccacaccggcgagaagccattctcctgcgcccag
tgtggcaagcacttcggccacctctatagcctcaagcgccacctcgttatccactcgggc
aacaagcccttcccctgcccccagtgtggcaaatgctactggcaccagggggatctgaac
cgccacatcgtcacccattcggggcagaagcccttctcttgcgcccaatgtggcaaatgt
ttctgggtgcagcgagacctcagccgccatgtaaggggccacaccgaccccattcctgcc
ccaggggaaaattatgtttattga
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