Xenopus tropicalis (tropical clawed frog): 108647860
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Entry
108647860 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF6-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108647860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108647860
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108647860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_11
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
Zn-ribbon_8
zf-met
Motif
Other DBs
NCBI-GeneID:
108647860
NCBI-ProteinID:
XP_031760217
UniProt:
A0A8J1JQQ5
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Position
6:complement(6076409..6090618)
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AA seq
777 aa
AA seq
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METQLPGSPAAGGLPEFQLEKIQFHSGKYKTMSEDFKENKEERRRLSAAGYRLVPYGSGI
TEMNRERREGLGARKQTGSDTNRKFPTCNGFVARSAHSNQPPVLQKPHAQEMNSAPKAQQ
NQMPQLCTVTGGKLIVTPKLTKHTQPDAKEKLHGSQKKINIISGKNLKPGKAQSTKQTVF
PKPFGVINPFVCVKCKRRFGSNGNLLIHQRIHTERPFSCTDCGKCFSHRTILREHRRAHM
GKGPFPHSTGGNKIPSGKDNFQRHQGASAKGKPLTCTECGKSFTTKPDLRVHERTHTGEK
PYVCTQCGKGFSQKGNLNKHSVIHSTEKPFTCTECGKGFITKQRLLEHFLIHTGEKPFAC
PECGKCFRLKEFLTRHLLTHTGLKPYTCTECGKSFSQRGNFYRHCHLHTGNKPYSCTECG
NCFATKIELQRHRLVHTGEKPFVCTECNSSFARLANLRSHQQLHTGEKPYKCTECGKCFR
MTSHLESHKKTHTGIKAFVCAECGKQFTHKNSLRQHQLIHTGEKPFVCNECGKSYRQKRS
LNAHLRIHTGEKPFACTECNKTFRSISWLQSHKQTHTGLKPYQCNECGKSFLMKANLKVH
QQRHTGEKPYTCAECGKSFTTKGSLHQHGHTHTGIKPYACTECGKCFGKKSELKYHQSIH
TGEKPFECTECGKHFASRSKLNNHQKIHTGEKPFQCTECGKSFCYRRHLTAHQRIHTGIK
AFGCTECGKQYLSKYKLQQHLMIHTGEKPFVCTECGKSYTSKRNLNIHMNSHTGEKL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggagactcagctccctggatccccagctgctgggggattaccagagtttcagttggag
aaaatacagttccattctgggaaatataagacaatgtctgaagattttaaagagaacaag
gaggagaggaggagactcagtgctgctggatacagactggttccatatggatcaggaatc
acagagatgaacagggagaggagagaagggcttggtgcaaggaagcagacaggaagtgac
acaaacaggaagttccctacatgcaatggctttgttgccagatctgcccacagtaaccaa
cctccggtgcttcagaaacctcacgcccaggagatgaattctgccccaaaagcccaacag
aaccaaatgccccaactttgcacagtaactggggggaagctgattgtaacccccaaatta
acaaaacacacacagcctgatgctaaggaaaagctacatggaagtcagaaaaagataaac
attatttcagggaaaaacctaaagccaggaaaggcccaaagcacaaagcaaactgtgttc
cctaaaccatttggggttataaatccgtttgtctgtgttaagtgcaagagaaggttcggc
agcaatgggaacctcctcatccatcagcgcattcacacagagagaccgttctcttgcact
gattgtgggaaatgtttctcccacagaaccatcctccgagagcaccgccgggctcatatg
ggaaaggggcccttcccccacagcactgggggcaataaaatcccatcaggtaaggacaac
tttcagaggcaccaaggggcgagtgctaaagggaaaccacttacctgcactgagtgtggg
aaatcattcacaaccaaacccgatttgcgagtacatgaacgcacacacaccggggagaaa
ccttatgtttgtacccaatgtggtaaaggcttttcccagaaggggaatcttaataaacat
tcagttattcattctacagagaaaccttttacctgcactgagtgtgggaaaggatttata
acaaaacagcggctgcttgagcacttcctgattcacacaggagagaaaccatttgcctgt
ccagaatgtgggaaatgtttccgactaaaggagtttcttacaaggcaccttctgactcac
actggattaaagccatatacctgtactgaatgtgggaaaagtttttctcaaaggggaaat
ttttatcgacattgtcatcttcacactgggaataagccctattcctgtacagagtgtgga
aactgttttgcaacaaagattgaactgcaaaggcaccgcctcgtacacactggggagaaa
ccatttgtctgtacagagtgtaattcaagctttgcaaggttagcaaaccttagatcacac
caacagcttcatacaggagagaaaccatataaatgcactgagtgtgggaaatgtttccgt
atgacaagccatctagaatctcataagaagactcacactgggattaaggcttttgtctgt
gcagagtgtgggaaacagttcactcacaaaaacagcctccgccaacaccagctgattcac
accggtgagaaaccatttgtctgcaatgagtgtgggaaaagctacaggcagaagaggagc
ctaaatgctcatctgcgaattcacacaggagagaaaccctttgcctgcacagagtgcaat
aaaaccttccgatcaataagttggcttcaatcccacaaacagactcacactggcctgaag
ccctatcagtgtaatgagtgtggcaaatccttcttaatgaaggcaaatcttaaggttcat
cagcagcgacatacaggagagaaaccttatacctgtgccgaatgtgggaaaagttttacc
acaaagggaagcttacaccaacacggtcacactcacactgggataaagccatacgcctgt
acagagtgcgggaaatgttttggaaaaaagagtgaactgaaataccaccaatctatccat
actggggagaaaccatttgagtgtacagagtgtgggaaacattttgcatctcgttcaaag
ctcaataaccatcaaaagattcatacaggggagaaaccatttcagtgtacggaatgtggg
aaaagcttctgttatagacggcaccttacagctcatcagcggattcacactgggattaaa
gcttttggatgtaccgagtgtgggaaacagtatctgtctaagtacaaactccagcagcac
ctgatgattcacaccggtgagaagccgtttgtctgtactgagtgtgggaaaagctacacg
agcaaaaggaacctaaatattcatatgaattctcacacaggagagaaactttaa
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