Xenopus tropicalis (tropical clawed frog): 108647920
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Entry
108647920 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108647920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108647920
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108647920
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
C2CH-3rd_BIRD-IDD
zf_UBZ
Zn-ribbon_8
zf-C2H2_6
LIM
HypA
zf-LYAR
Zn_ribbon_SprT
zf-met
GAGA
Elf1
Motif
Other DBs
NCBI-GeneID:
108647920
NCBI-ProteinID:
XP_031760143
UniProt:
A0A8J1JQI3
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Position
6:complement(4887592..4890884)
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AA seq
416 aa
AA seq
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MAEYQDSSEDLDTSWKHLQGAGKFTGPGYERAETYSQYLDTEYEHGSASSDPSGFLCSKC
GVRFSVNRDLLTHLCGWIGMNYTSRYHDLYEGVKPFVSTLNDKHNSVNQTLPKDQQFHTG
ETSFICTECGKNFSPKIHLQSHQRLQAGEKPFICTECGKSFSFEIALLRHQMIHTGVKPL
QFTKCGNCFSLEMNDHMTDIEEKPFTCTECGLIFTEKSSLASHYKNHMGSNYGMQIYQRG
SFRIHTGETAFTCTECGKDFSRKWHLQRHQKIHTGEKPFTCTECGKQYTRKSHLNRHERI
HTGEKPFTCAVCGESFSQKSNLRSHFKVHAGAKCAQRFPEKGILGSELAIHIVKKRFLCT
ECGKYFTRKWHLQRHQKIHTGEKPFICSECGKGFSRKTHLHCHYKLHTETMWEQVL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagaataccaggattcctcggaagatctggatacaagctggaaacacttacaaggt
gctgggaaattcactgggcctgggtatgaaagagccgagacctactcccaatatctagac
actgagtatgaacacggctctgccagctccgacccatcgggtttcctctgttctaagtgc
ggagtgagattctctgtgaacagggaccttctgacccatctgtgtggctggatcgggatg
aactacactagccgatatcatgatttgtatgagggggtgaaaccatttgtcagcacattg
aatgacaaacacaacagtgttaatcaaactttgccaaaggaccagcagtttcacacaggg
gagacaagtttcatctgtacagaatgtggcaagaatttctctccaaagattcaccttcaa
agtcaccagagactccaggcaggggagaaaccattcatctgtactgaatgcggcaaaagc
ttttcttttgagattgctcttttgagacatcagatgattcacacaggagtaaaaccatta
cagttcaccaagtgtggtaattgcttctcactcgagatgaatgatcacatgactgacatc
gaggagaaaccattcacatgtacagaatgtgggctaatattcactgaaaagagcagcctt
gccagtcactacaaaaaccacatggggtccaactatggtatgcagatataccaaaggggg
agtttcaggatccacacaggagagaccgctttcacatgtacagagtgcgggaaagatttc
tctcgaaagtggcaccttcagcgccaccagaaaattcacacgggagaaaaaccctttaca
tgtactgaatgcgggaagcaatacactcggaagagccacctcaaccgccacgagaggatt
catacgggagagaagcctttcacttgtgcagtatgtggggaatctttctctcagaagagc
aatctgcgcagtcactttaaagtgcacgctggggcaaaatgtgcccaaaggttccccgag
aagggtattctgggcagcgagctggcaatccacatagtgaagaaacgtttcttgtgcacc
gagtgtgggaagtatttcacgcgcaagtggcaccttcagcggcaccagaaaattcacaca
ggggagaaacccttcatttgttctgaatgtggcaaaggcttctctcgaaagacccacctt
cactgccactataaacttcacacagagacgatgtgggaacaagtcctctaa
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