Xenopus tropicalis (tropical clawed frog): 108648775
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Entry
108648775 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF7.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108648775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108648775
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108648775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
KRAB
C2CH-3rd_BIRD-IDD
Fer4_9
Motif
Other DBs
NCBI-GeneID:
108648775
NCBI-ProteinID:
XP_031748908
UniProt:
A0A8J1ITJ8
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All DBs
Position
9:complement(4088172..4097737)
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AA seq
497 aa
AA seq
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MGMWEEASDPVMGKKDKNEERKERILNLTLEIIYLLTGEGYVIPKKKSPTVGLGALHAPG
SVIQKENDKKILELISNIIQLLTGEVAIRCEDVSIYFSLEEWEYIKGNKALYREGIKEEE
EEPQQLRPLAACEYKDGSDVTAHTEATLCCNNDGNLTNPDVSPAEQPPPANGIKEEEASC
EEETQSDCSINPLTEQIQGTNTPIMGRSQNTLQMTGNNHDENSHQSPHKSHITKNKLRRK
YSCNECQIHFSNKRDFHKHQRTHKREKLFPCSECGKCFSRKFYRDCHQRTHTGEKPFSCS
ECGKCFSEQSRLKIHYRTHTGEKPFSCVECGKCFLRKPHLHSHQMTHKGEKPFSCSECGK
CFSNQSTLKIHNRTHTGEKPFSCSECGKCFSRQSQLKIHYKTHTGEKPFSCSECGKCFSR
KSELDRHQRTHTGEKPFLCSECGKCFSQQSHLKIHYKTHTGEKPFSCSECGKCFLRKSNL
DRHQRTHTGEKPFSCSE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtgggaggaagcgagtgacccagtgatggggaagaaggataaaaatgaggag
cggaaggagagaatcctgaatctcacactggagattatctatctgctgactggagagggc
tacgtcatccctaagaagaagagcccaactgtgggtttgggggccctgcatgcccctggc
tccgtcatacagaaggaaaatgacaagaagatcctggaactcatctccaacatcatccag
ctgctgactggagaggttgccataaggtgtgaggatgtttccatctatttttccttggag
gagtgggagtatataaaaggaaacaaggccctttacagggaagggataaaggaggaggag
gaggagccccagcagctccgcccactggcagcctgtgagtataaagatgggagcgatgtt
acagcacatacggaagcaactttatgttgtaataatgatgggaatctcacaaaccctgat
gtttctccagcggaacagcccccaccggccaatgggattaaagaggaagaggcttcatgt
gaagaggaaacccaatcagattgcagcattaatccccttacagaacagatacagggaaca
aatactcctatcatggggagaagccagaataccttacaaatgacgggtaataatcatgat
gaaaattcccaccaatctccacataaatctcatataacaaaaaataaattacgtagaaaa
tacagctgcaatgagtgtcagatacattttagtaataaaagagattttcataaacaccag
agaacccacaaaagagagaaactttttccttgttctgaatgtggaaaatgtttctcaaga
aaattttatcgtgattgtcatcaaaggactcacacaggggagaaaccattttcatgttct
gaatgtgggaaatgtttttcagagcaatcccgtcttaaaattcattatagaacccacaca
ggggagaaaccattttcttgtgtagaatgtgggaaatgttttttaagaaaacctcatcta
catagtcatcaaatgactcacaaaggggagaaaccattttcatgttctgaatgtgggaaa
tgtttttcaaatcaatctactctgaaaattcataatagaacccacacaggggagaaacca
ttttcttgttctgaatgtgggaaatgtttttcacggcaatcccaacttaaaattcattat
aaaacccacacaggggagaaaccattttcttgttccgaatgtgggaaatgtttttcaaga
aaatctgagcttgatcgtcatcaaaggactcacacaggggagaaaccatttttatgttct
gaatgtgggaaatgtttttcacagcaatcccaccttaaaattcattataaaacccacaca
ggggagaaaccattttcttgttctgaatgtgggaaatgttttttaagaaaatctaatcta
gatcgtcatcaaaggactcacacaggggagaagccattttcttgttctgaatga
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