Xenopus tropicalis (tropical clawed frog): 108648851
Help
Entry
108648851 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF6-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108648851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108648851
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108648851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Fer4_10
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
108648851
NCBI-ProteinID:
XP_017952881
UniProt:
A0A8J0SWW4
LinkDB
All DBs
Position
9:complement(4622965..4626017)
Genome browser
AA seq
737 aa
AA seq
DB search
MLVSLPDGEYEDKREIPADLGGTLCYNNEPSKIGAEGANENLINSDISLASLERGNQSDC
SINPLTEQIQGTDTPTPNTETYNCSECHKYFSTKVGLLEHQKTHTGVKSFVCSVCEKCFK
YQSKLILHQRSHTGEKPFSCSECGKRFTQHVHLIEHHRTHTGEKPYSCSHCGKRFNCPSK
LTVHQRSHTGERPYSCSECGKGFKDSWNLRAHLRIHTGEKPFTCSQCEKCFTHRSALKRH
LALHKREKTFSCSRCGKCFTHRSDLNRHLKSHKGEKTFSCSQCGKCFSCTSALNVHLRSH
SGERPYSCSECGKCFKYYSNLTVHQRTHTGEKPFSCPECGKCFTNGASLTYHKKCHTGEK
PFTCTECGKCFRNSKGLKFHTRIHTGEKPFTCTECGKCFCNSTGLKSHTRIHTGEKPFTC
TECGKCFRNSMGLKFHTRIHTGEKPFTCTECGKCFRNSTDLKFHTRIHTGEKPFTCTECG
KCFRNSTDLKFHTRSHTGEKPFTCTECGKCFRNSSGLKFHTRIHTGEKPFTCIECGKCFR
DCTSLKIHTRIHTGEKVKPFSCTECGKCFCNSTGLKFHTRIHTGEKPFTCTECGKCFRDH
TSLKIHTRIHTGEKPFTCTECGKCFRNSSGLKFHTRIHTGEKPFTCTECGKCYRDRTGLK
FHTRSHTGEKPFTCTECGKCFRNSTSLKIHTRIHTGEKPFACNECGKYFMYRYQLTAHSQ
LHTGEEPLPDSNCTDTQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtatctctgccagacggtgaatatgaagataagagagagattccagctgatctg
ggaggaacattatgttataataatgagccaagcaagattggggctgaaggtgctaatgaa
aatctcataaactctgacatttctttagcttcgttggaaaggggaaaccaatcagattgc
agcattaatccccttacagaacagatacagggaacagacacacccactcccaacacagag
acgtataactgttctgagtgccataaatactttagtactaaggtcggtcttctcgagcat
cagaaaactcacacaggggtaaaatcatttgtctgttctgtgtgtgagaaatgttttaag
tatcagtcaaaacttattttacatcagagaagtcacacaggggagaaaccgttctcttgt
tctgaatgtgggaaaaggtttacccagcatgtacatcttattgagcatcacagaacccac
acaggagagaaaccctattcctgttctcactgtgggaaacgttttaactgtccctcaaaa
cttactgtacatcagagaagccataccggagagagaccttattcatgttccgaatgtggg
aagggctttaaagatagctggaatctccgtgcccatctaagaatccacacaggggagaaa
ccattcacttgttctcagtgtgagaaatgttttactcatcgctcggctcttaaaagacac
ctggcacttcacaaacgagaaaaaacattttcttgttctcggtgtgggaaatgtttcact
catcgctcagatcttaacagacacctgaaatctcataaaggagaaaaaacattttcttgt
tcccagtgtgggaaatgtttcagttgtacctcagcccttaatgtgcatctcaggtctcac
tctggagagagaccgtactcttgttctgagtgtgggaaatgttttaaatattactcaaac
cttactgtgcatcaaagaactcacacaggggagaaaccattttcctgccctgaatgtggg
aaatgtttcactaatggagcaagccttacataccataaaaaatgtcacacaggggagaaa
ccattcacttgtactgaatgtgggaaatgtttccgtaatagcaagggccttaaattccat
acaagaattcacacaggggagaaaccattcacttgtactgaatgtgggaaatgtttctgt
aatagcacgggccttaaatcccatacaagaattcacacaggggagaaaccattcacttgt
actgaatgtgggaaatgtttccgtaatagcatgggccttaaattccatacaagaattcac
acaggggagaaaccattcacttgtactgaatgtgggaaatgtttccgtaatagcacagac
cttaaattccatacaagaattcacacaggggagaaaccattcacttgtactgaatgtggg
aaatgtttccgtaatagcacagaccttaaattccatacaagaagtcacacaggggagaaa
ccattcacttgtactgaatgtgggaaatgtttccgtaatagctcgggccttaaattccat
acaagaattcacacaggggagaaaccattcacttgtattgaatgtgggaaatgtttccgt
gattgcacaagccttaaaatccatacaagaattcacacaggggagaaagtgaaaccattc
agttgtactgaatgtgggaaatgtttctgtaatagcacaggccttaaattccatacaaga
attcacacaggggagaaaccattcacttgtactgaatgtgggaaatgtttccgtgatcac
acaagccttaaaatccatacaagaattcacacaggggagaaaccattcacttgtactgaa
tgtgggaaatgtttccgtaatagctcgggccttaaattccatacaagaattcacacaggg
gagaaaccattcacttgtactgaatgtgggaaatgttaccgtgatcgcacgggccttaaa
ttccatacaagaagtcacacaggggagaaaccattcacttgtactgaatgtgggaaatgt
ttccgtaatagcacaagccttaaaatccatacaagaattcacacaggggagaaaccattt
gcttgcaatgaatgtgggaaatattttatgtatcgttatcagctcactgcacattcccag
ttacacacaggggaggaaccattgcctgacagtaactgtactgatacacagtga
DBGET
integrated database retrieval system
