Xenopus tropicalis (tropical clawed frog): 108648854
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Entry
108648854 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF22-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108648854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108648854
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108648854
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
108648854
NCBI-ProteinID:
XP_017952887
UniProt:
A0A803J5R6
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Position
9:complement(4156624..4169006)
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AA seq
530 aa
AA seq
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MGCSLNNCSAEDYVSVVVKAELASSEGDRHFEDQIQGIDKSTVMGRSLDNSTTEQIQGTD
TPTPIMGRSPVKTSNKYDENADTSPDKSGIATNTLCNKYSCNECHKHFTDRRKFGKHQGM
HKRGKPFSCSECGKCFPCRWNLDRHHRTHTGEKPFLCTECGKCFSCQSDLKKHYRTHTGE
KPYSCSECGRSFSYQSHLKEHYRTHTGEKPFSCSECGKCFASLYILNVHQRRTHTGEKPF
CCSECGESFAASSELTVHRKTHTGEKPYSCSECGKCFSFRSHLYNHRRTHTKEKPFSCSE
CGKCFPYQSCLKEHYRTHTGEKPFACSDCGKCFAMLYNLNVHHRRTHSGEKPFSCSDCEK
SFATSSDLTSHRRRTHTGEKPFSCSICGKCFAFSSELTVHGRTHTGKKLFPCSECGEYFA
SSSERICHQRRHHPKKPFSCSECGKCFSGPSVIKEHLKTQTEEKRFSSMKCSKCYSCPEC
GKCFFTSSELTVHHRTHTGEKPFSCSVCGKGFTRNRNLKIHFQSHTVGKP
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcagcctgaataactgctcggcggaggactatgtatcagttgttgttaaagcg
gaactggcatcatctgaaggagatcgccattttgaagaccaaatacaaggaatagataag
tcaactgtcatggggcggagcctggacaacagcacaactgagcagatacagggaacagac
acacctactcctatcatggggcgcagccctgtaaaaactagcaataaatatgatgaaaat
gcagatacatcccccgataaatccggcatagcaacaaatactttgtgtaacaaatacagc
tgcaatgagtgccacaagcattttactgataggagaaaatttggtaaacatcaaggaatg
cacaagagagggaaacctttttcctgttctgagtgtgggaaatgttttccatgtcgatgg
aaccttgatcgtcatcacagaactcacacaggggagaaaccatttttatgtactgaatgt
gggaaatgtttttcatgtcaatctgaccttaaaaaacattacagaacccacacaggggag
aaaccatattcttgttctgaatgtggaagaagtttttcatatcaatctcaccttaaagaa
cattacagaacccacacgggggagaaacctttttcttgctcggaatgtggaaaatgtttt
gcttctttatatatactcaatgtccatcaacgacgaacccacacaggggagaaaccattt
tgttgttctgaatgtggggagagttttgccgcttcatcagaacttactgtccatcggaaa
acccacacaggggagaaaccttattcttgttctgagtgcgggaaatgtttttcatttcga
tcccacctttataatcatcgcagaacccacacaaaagagaaacctttttcttgttctgag
tgtgggaaatgttttccatatcagtcttgccttaaagaacattacagaacccacacaggg
gagaaaccttttgcttgttctgattgtgggaaatgttttgccatgttatataaccttaat
gttcaccatcgacgaacccactcaggggagaaacccttttcttgttctgattgtgagaag
agttttgccacttcatcagaccttactagtcatcgacgacgaacccacacaggggagaaa
ccattttcttgttctatttgtgggaaatgttttgccttttcatcagaacttactgtccat
ggacgaacccacacagggaagaaactttttccttgttccgaatgtggggaatattttgcc
tcttcatcagaacgtatttgccatcaaagacgacaccacccgaagaaacctttttcctgt
tcagaatgcgggaaatgtttttcaggcccatcagttattaaagaacatctcaaaacccag
acagaagagaaaagattttcttctatgaaatgtagtaaatgttattcttgtcctgaatgc
gggaaatgttttttcacttcatcggaacttaccgtccatcacagaactcacacaggggag
aagcctttttcttgttctgtgtgtggaaaaggttttacacgtaatcgtaatcttaagata
cattttcagagtcacacagtaggaaaaccataa
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