Xenopus tropicalis (tropical clawed frog): 116406443
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Entry
116406443 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF8.2DB-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116406443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116406443
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116406443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf_UBZ
zf-UBP
zf-C2H2_11
zf-met
DUF6434
zf-LYAR
Zn-ribbon_8
zf_C2H2_ZHX
LIM
zinc_ribbon_9
zf_CCCH_5
Motif
Other DBs
NCBI-GeneID:
116406443
NCBI-ProteinID:
XP_012819726
UniProt:
A0A8J0SQ47
LinkDB
All DBs
Position
6:complement(2849362..2851547)
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AA seq
344 aa
AA seq
DB search
MSIPNSQMELPSVAQHECPECGKRFLEKTKLTIHYRCHTGEKLFMCTECGKSFRKKQHLT
EHQFIHTGEKPFICTECGKGFRQKQVLTEHQLIHTGEKPFMCMECGRSFRVKRILIQHQR
LHTGEKPYACTECDKQFNVRSNLLSHQKIHTGVKPFVCMECGKSFSDKSTFQSHQRIHTG
EKPFSCTECGKCFTKKTNLNAHYKVHTGEKPFSCTECGKCFTTKRQLSGHYKVHTGEKPF
ACADCGRCFVLQGSLTKHQRIHLQDQLLCVGNSGNLILQSPTSNTIIPTGEKPFTCTEWG
FPNRRFHLLPQNIHTGEEIQSLISPPYSPIPTLPIGHWSCQSYL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcccaactcccagatggaacttccctcagtggcacaacatgaatgcccagaa
tgtgggaaaagattcttggaaaaaaccaaacttactattcattacagatgtcacaccggg
gagaaactattcatgtgcacggaatgtgggaaaagtttcaggaaaaaacaacaccttaca
gaacaccaatttattcacacgggggagaaaccattcatatgcacagagtgtgggaaaggt
ttcaggcaaaagcaagtccttacagaacaccaattaattcacacaggggagaaaccattc
atgtgcatggaatgtgggagaagttttagagtaaaaagaatactaatacaacaccagaga
cttcacacaggggagaaaccctatgcatgtacagaatgtgataaacaattcaatgtaagg
agtaaccttctcagccaccagaagattcatacaggggtaaaaccatttgtgtgcatggaa
tgtgggaaaagcttctccgacaagagcacctttcagagccaccagagaattcacacgggg
gagaaaccattttcttgcacagaatgtgggaaatgtttcaccaaaaagaccaatcttaac
gcccattacaaggttcacacaggggagaaaccattttcttgcacagaatgtgggaaatgt
ttcaccacaaagagacagcttagcggtcattacaaggttcacacaggggagaaacccttt
gcttgtgcagattgtgggagatgtttcgttttacagggaagccttaccaaacaccagaga
attcatttgcaagatcaacttttatgtgtagggaattctggaaaccttattctacaaagt
ccaaccagcaacaccatcatccccacaggggagaaaccattcacttgcacagaatggggt
ttccccaatagaaggtttcatctcctcccccagaacattcatacaggagaagagatacag
tcactgatttctcctccatattctcccattccaacattgcctattggccattggagctgc
caatcatatctgtag
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