Xenopus tropicalis (tropical clawed frog): 116406449
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Entry
116406449 CDS
T01011
Name
(RefSeq) ATP-binding cassette sub-family B member 5-like isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116406449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
116406449
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116406449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_5
AAA_29
AAA_16
AAA_15
AAA_14
AAA_30
Zeta_toxin
Rad17
AAA_7
G-alpha
DEAD
AAA_21
DUF815
TniB
NACHT
AAA_18
ATP-synt_ab
KAP_NTPase
DUF4059
Motif
Other DBs
NCBI-GeneID:
116406449
NCBI-ProteinID:
XP_002933334
UniProt:
L7N303
LinkDB
All DBs
Position
6:39127996..39162225
Genome browser
AA seq
1265 aa
AA seq
DB search
MDTEYAVNTSNNTDTLLDKAQEETTNVNEKSKQEQIIPVGPIQIFRFAGWLDIFLMIFGT
LGAMGCGSCFPLMNVVFGEMANSFLCHNSSLQNSSLCAEFKPIEEQIQLFSLYYAGLGFG
ALVCGYLQVSFWVLTASRQTRKMRKAFFHSVLSQEIGWFDVTKSGDLNTRLTEDINKINN
GIGDKVGHFFQNSTTCLCGILIGLIKGWKLALVILATSPVLALASAMFARILASLTTKEL
AAYAKAGAVAQEVLSSIRTVVAFGGQEKEIKRYTENMREAKDIGIKKAVASQFSLGLVYG
AFYSTYGLGFWYGTTLVLGDDAYRIGDVLAVFFNVTISSYCIGQAASHFEAFSIARGAAY
SIFKVIQKPSFINNFSTEGFKPDNIKGNIELKNIHFSYPSRPDVKVLNGINLSIKSGQTV
ALVGQSGCGKSTIVQLLQRLYDPQEGTLAVDGHDIKSLNVRYYRELIGVVSQEPVLFGTT
IKQNIKYGREDVTDEEIEKAVKEANAYDFIMALPDKYETLVGERGAQLSGGQKQRIAVAR
ALVRNPKILLLDEATSALDTGSEAIVQAALDKASKGRTTIVVAHRLSTIWTADAIVVFEN
GAVAEQGTHSELMEKRGIYFSLATAQTVQLSEDKEITETKQNGIHEKTSLIQRFNSQASL
KNIQLEEEDEEEKPDSKEKDLPSVSFLQLMKLNRSEWPYILLGIFAAGVNGAINPLFSIF
YARVIAVFASNDPERIRHESTIYSILFVVISVIILIAYTVRGYMFGRSGETLTMRLRHMA
FKAMIQQDIAWFDDKDNNTGALTTRLATDASEIQTATGSRLGLVAENVVGIILTVVIAFV
YGWEMSLLAIAMAPFVVIAGMLEFTAVAGFATRDKKQLQRSGKIATEAVDNIRTLVSLTR
ERTFEEMYSESLQKPYRNAQRKAHMYGMCFATGQSFMYFIHAAVFRFGAYLIRVERMNVE
EVFLVFSVITFGAMTLGNTLSFAPDYAKAMSAARYLFALFEREPTIDSFSQQGQKPEYFS
GSLEFRNVSFNYPTRSDVAVLRDLCIKVESGQTVAFVGSSGCGKSTSVQLLQRFYDPQEG
EMLLDDVDAKCFNVQWLRSQMGIVSQEPVLFDCSIAENIAYGDNSRTVSMDEIQSAAKAA
NIHSFIQGLPLKYETLVGAKGTQLSGGQKQRIAIARALIRAPKILLLDEATSALDNESEK
VVQQALDQARKGRTCILIAHRLTTVQNADIIVVMNKGKIIEHGSHQELLGKHGAYYDLVN
AQAII
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggacacagagtatgcagtcaatacatccaataatacagacactttattggataaagca
caggaggagacaacgaatgtaaatgagaaaagtaaacaggaacaaataataccagttggt
ccgatccaaattttccgatttgcaggctggctggatattttcttaatgatctttggaaca
ctgggcgcaatggggtgtggttcgtgtttcccacttatgaacgttgtgtttggggaaatg
gctaacagcttcctgtgccacaactcatctcttcagaactcctccttatgtgcagagttt
aaaccaatagaagaacagatacaactattctcactgtactacgcaggactgggttttggc
gctttagtctgtggatatctccaggtctccttctgggttttaactgcttccagacagaca
agaaaaatgaggaaagctttctttcattctgtgctgtctcaagagattggttggttcgat
gtcacaaaatctggagatctcaacacccgactcaccgaagacatcaataaaataaataat
ggaattggagataaagtcggacatttttttcaaaatagcacaacctgtttatgtggcatt
ttaattggattaatcaagggctggaagcttgcacttgtcatcttggctactagtcccgtt
ctagcattggcatcagcaatgtttgcgaggatattggcctccctaactactaaggaactc
gcagcgtatgcaaaagcaggtgcagtggcccaagaagtactttcatcaataaggactgtt
gtggcttttggaggacaggagaaagaaataaaaagatacacagagaacatgagagaggcc
aaagacattggtataaaaaaagcagttgcatctcagttttcacttggattagtatatgga
gccttttattctacttatggacttggtttttggtacggcacaaccttagttttaggggat
gatgcttacagaattggagatgtactagcggtattcttcaatgtgactataagcagttat
tgcattggacaggcagcttctcattttgaagcattcagtattgcaaggggtgctgcttac
agtatctttaaggttatccaaaagccgtccttcattaacaacttctcaactgaaggcttt
aaacctgataacataaaaggaaatattgagttgaaaaatattcacttttcctatccttca
aggccagatgttaaggttttgaatgggattaatctgagcataaaatctgggcagactgtg
gccttggttgggcaaagtggatgcggaaagagcacaatagtccaactcctacagagactg
tatgatccgcaagagggaacgttggctgtggatggccatgacatcaaatctctgaatgta
agatactacagagagctaataggagtggtcagccaggaacccgtcttgtttggaacaaca
attaaacagaacattaaatatggaagagaagatgttacggatgaagaaattgaaaaggct
gtgaaggaagcgaatgcctacgacttcattatggctctgccagataaatatgaaactctt
gttggagaaagaggggcacagctgagtggtgggcagaaacaacgtatagcagttgccagg
gccttggtgagaaatccaaaaattcttcttctggatgaagccacctctgctttggatact
ggaagtgaagctattgttcaggctgctctagataaggcgagtaaaggccggaccacgatt
gttgtagctcatcgtctcagtacaatatggacagccgatgctatagtcgtgtttgaaaat
ggtgctgtggctgaacaaggaactcattctgagctgatggagaaaaggggtatatacttc
tctcttgcaacagcacagactgtacagctttccgaagataaagagattacagaaacaaag
caaaatggaatacatgaaaaaacttccctgatacaacgttttaattcccaagcctctctg
aaaaatatacaattggaggaggaggatgaagaagaaaaacctgactcaaaagagaaagat
cttcccagtgtgtcctttctccaacttatgaagctaaacagatcagagtggccttatatt
ctccttggaatctttgccgctggggttaatggagcaataaatccattattttctatattt
tatgccagggttatagctgtttttgcatcaaatgatccagaaagaatccggcatgaaagt
accatttactcaattttatttgtagtcattagtgtgatcattttgatcgcatacactgta
cggggttatatgtttgggagatctggagaaaccctgacaatgcggttaagacatatggcc
ttcaaagcaatgatacaacaggacattgcgtggtttgatgacaaggacaacaatacagga
gcactgacgacaagacttgcaacagatgcttctgagattcagactgctacaggctccaga
ctcggtttagtggcagaaaatgtggttggcatcattttgactgtcgttattgcttttgtg
tatgggtgggaaatgtcccttctggctattgcaatggctccttttgtagtcattgctgga
atgctggagtttactgctgtagctggctttgctactcgggataagaagcagctgcagagg
tctggaaagattgcaacagaagcagtggataatattcgcactctggtatcattaaccagg
gaaaggacctttgaggagatgtactctgaaagcttacagaaaccatacagaaatgcccaa
cgtaaagcacacatgtatggaatgtgttttgcaaccggtcagtcattcatgtatttcatt
catgcagcagttttccgctttggggcatatttgatcagagttgaacggatgaatgtagag
gaagtgtttctagtattcagtgtcataacatttggagccatgacactgggaaacacatta
tcctttgcacctgactatgctaaggccatgtctgctgccagatatctttttgcgttgttt
gaaagagaaccgacaatagacagcttcagtcagcaggggcagaaaccggaatacttctct
ggatctttagaattccgtaatgtttcatttaattatccgacgcgttcagacgttgcagtg
cttcgagatctatgcattaaagtagaaagtgggcaaacggtggcatttgttggtagcagc
ggatgtgggaagagcacttctgttcagctcctacagaggttctatgatccgcaggaagga
gaaatgctgttggatgatgtggatgccaaatgcttcaatgtccaatggcttcgttctcaa
atgggaattgtgtcccaagagcctgtcctgtttgactgcagcattgctgaaaatatcgcc
tatggtgacaactcccgcactgtgtctatggatgaaatacaaagtgcagccaaagcggcc
aatatccactcattcatacaaggacttcctctgaaatatgagactctggttggagcaaag
ggaactcagctctccgggggacagaagcagagaatagctattgctagagcactcatcagg
gcaccgaaaattctacttctggatgaggccacttccgcactagacaatgagagcgaaaag
gttgtacagcaagctcttgatcaggccaggaaaggaaggacctgcatcctgattgcgcac
agactgacaaccgtacagaatgctgatattattgtggttatgaacaaagggaagatcata
gaacatggaagtcaccaagagctgctcggcaaacatggcgcatattatgatctagtcaat
gcccaagctataatctaa
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integrated database retrieval system
