Xenopus tropicalis (tropical clawed frog): 116406477
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Entry
116406477 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116406477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116406477
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116406477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf_UBZ
zf-AN1
zf-C2H2_11
Zn-ribbon_8
C1_4
Zap1_zf1
zf-LYAR
zf-trcl
HypA
Motif
Other DBs
NCBI-GeneID:
116406477
NCBI-ProteinID:
XP_031760101
UniProt:
A0A8J1JU34
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Position
6:5081142..5088763
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AA seq
572 aa
AA seq
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MDPVPGAAEPEVLQIKVEQEDSDDHLNPADSEAGTYDGADITEDDIIQIKIEEDEVDPED
HTDTGKRIEFTNRDTCGSCSAPGAAKGPSLCGAGLRGHSQFKSGTRSENRSTSSKALCFI
CCKCGKSFPSNSDLRKHVCGPRARRRSFNSRRNEEAKRRRKKPKEKQLFICTECGKHYCS
KHSLQTHLMIHTGERPFKCKECGKGFARKVSLVTHERIHTGEKPFACKECGKRFSYKISL
MTHEWIHTGVKPFKCTACGKGFCLKSQLQGHLKSDNPCTENGKNSDGKTPAEEKIFTCKQ
CGKTFSRKRSLDSHQKIHPDGKPFLCTECGKSFSRKRNLHKHQKIHTREKPYKCMECGES
FAHKGSLSCHQKIHSVERPFKCNECGKSFTLKTTLQTHQKLHTGEKPFSCTECGKRFVQK
SNFLIHRRIHTGEKPFICSECGKGFSHKIHLLSHERNHRGEKPFTCNECGKSFSQNGSLY
NHKKIHTGEKPFTCTECGKSFFQKNKLLRHEMIHTGEKPFVCTECGKGFSQKGNLHTHLK
VHTKDKPFTCTDCGEKFTLKSKLQKHQKLHID
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgttcctggggccgcagaaccagaagtgttgcagataaaggtagagcaagaa
gactctgacgaccatctaaacccagcagacagtgaggctgggacatatgatggggcagat
attacagaggatgatatcatacagataaagattgaggaggatgaagtagatcctgaagat
cacacagacactggaaagagaatagaattcactaatagggatacctgtggttcatgtagc
gccccgggggcagctaaggggccgtcactgtgtggagcaggactcagaggacattcacag
tttaaatcgggcacaagatctgagaatcgttcaacaagttctaaagctctgtgttttatc
tgctgcaaatgtgggaaaagcttccccagcaacagtgacctccgtaaacacgtctgtggc
ccccgcgctagaaggcggagctttaatagtaggcggaacgaggaagcaaagaggagaagg
aaaaaacccaaggaaaagcagctcttcatctgcacagaatgcgggaagcactactgcagt
aagcacagtctgcagacacatctgatgatccacactggcgagaggccgttcaaatgtaag
gaatgtggcaaaggctttgctcgcaaggtcagcctagtgacccacgagaggatccacaca
ggggagaaaccatttgcctgcaaagaatgtggcaagagattctcctacaagatcagcctt
atgacacacgagtggattcacacaggggtgaaaccgtttaagtgcacggcctgcggcaaa
gggttctgtctcaagagtcagcttcagggtcacctaaaaagcgacaatccatgtacggaa
aacgggaaaaattccgatgggaagacccccgcagaggagaaaatcttcacctgcaaacag
tgcggcaaaaccttctctcggaaaagaagcctcgacagccatcagaagattcacccagat
gggaagcccttcctgtgcacggaatgtgggaaaagcttctctaggaaacggaacctccat
aaacaccagaaaattcatacaagggaaaaaccctataagtgcatggaatgtggggaaagt
ttcgctcataagggaagcctctcttgccaccagaaaatccattcggttgagagacctttc
aagtgcaatgaatgtgggaagagcttcacgctaaagacaacgcttcaaacacaccagaaa
cttcacaccggggagaaaccattctcctgcaccgaatgtgggaaaagatttgttcagaag
agcaactttctgatccacaggaggattcacaccggggagaaaccattcatctgttccgaa
tgcgggaagggcttctctcacaagattcaccttttgtcccatgagagaaatcaccgaggt
gaaaaaccgtttacctgcaacgaatgtggaaaaagtttctcccaaaatggcagcctctac
aatcacaaaaagattcacaccggggagaaacccttcacctgcacggaatgtggcaaaagc
ttcttccagaagaacaaacttctacggcacgagatgatccacactggggagaaacctttt
gtatgtacagagtgcggcaagggcttctctcagaagggcaacctgcacactcacctgaaa
gttcacacaaaagacaaaccgttcacgtgtacagactgtggggagaaattcaccctcaaa
agcaagcttcagaagcatcagaaactccacattgactag
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