Xenopus tropicalis (tropical clawed frog): 116406478
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Entry
116406478 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF7.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116406478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116406478
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116406478
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
KRAB
Motif
Other DBs
NCBI-GeneID:
116406478
NCBI-ProteinID:
XP_031748902
UniProt:
A0A8J1ITI2
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All DBs
Position
9:3326409..3330121
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AA seq
533 aa
AA seq
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MGMWEEASDPVMGKKDKNEERKERILNLTLEIIYLLTGEGYVIPKKKSPTVGLGALHAPG
SVIQKENDKKILELISNIIQLLTGEVAIRCEDVSIYFSLEEWEYIKGNKTLYREGIKEEE
EPQQLRPLACEYKDGSDVTAHTEATLCCNNDGNLTNPDVSPAEQPPPANGIKEASWEGGS
QSDCSINPLTEQIQGTDTPTPIMGCSLNNSSAGDYISVVVKEEPASSEEDNHFADQIQLM
DKSTVMGCSLNNSSAEDYISYDNKEEAASWEGGNQSDCSINPLTEQIQGTDTPTPIMGSS
LLKVHGKYSCNECHKHFSNKRNFDKHQKTHMGEKPFSCSECEKCFTSQKDLTVHWRTHTG
EKPYSCSECGKCFSHQSNCLVHQRTHTGEKPFSCSECAKGFTRQKDLTVHQRIHTGEKPY
SCPECGKCFSNRSNYVRHHRTHTGEKPFSCSKCGKSFISLAELTVHRRRTHTGEKPFSCS
ECGKCFASSSELTVHRRQIHTGEKPFSCSECGKCFARNSILKKHLQIHTGGKP
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtgggaggaagcgagtgacccagtgatggggaagaaggataaaaatgaggag
cggaaggagagaatcctgaatctcacactggagattatctatctgctgactggagagggc
tacgtcatccctaagaagaagagcccaactgtgggtttgggggccctgcatgcccctggc
tccgtcatacagaaggaaaatgacaagaagatcctggaactcatctccaacatcatccag
ctgctgactggagaggttgccataaggtgtgaggatgtttccatctatttttccttggag
gagtgggagtatataaaaggaaacaagaccctttacagggaagggataaaggaggaggag
gagccccagcagctccgcccactggcctgtgagtataaagatgggagcgatgttacagca
catacggaagcaactttatgttgtaataatgatgggaatctcacaaaccctgatgtttct
ccagcggaacagcccccaccggccaatgggattaaagaggcttcatgggaaggtggaagc
caatcagattgcagcattaatccccttacagaacagatacagggaacagacacacctact
cctatcatggggtgcagcctgaataacagctcggcaggggattatatatcagttgttgtt
aaagaggaaccggcctcatctgaagaagataaccattttgcagaccaaatacaattaatg
gataagtcgactgtcatggggtgcagcctgaataacagctcggcagaggattatatatca
tatgacaataaagaggaggcggcttcatgggaagggggaaaccaatcggattgcagcatt
aatccccttacagaacagatacagggaacagacacacctactcctatcatggggagcagc
ctcttaaaagttcatgggaaatacagctgcaatgagtgccataaacattttagtaataag
agaaactttgataaacatcaaaaaacccacatgggggagaaacctttttcttgttctgaa
tgtgaaaaatgtttcactagccaaaaagatctcactgttcattggagaacccacacagga
gagaaaccctactcctgctctgaatgtgggaaatgtttttcacatcaatcaaactgcctt
gttcatcaaagaactcacacaggggagaaaccattttcttgttctgaatgtgcaaaaggt
ttcactcgtcaaaaagatcttactgtccatcagagaatccacactggagagaaaccctat
tcctgccccgaatgtgggaaatgtttttcaaatcgatcaaactacgttcgtcatcacaga
acccacacgggggagaaaccattttcttgttctaaatgtgggaaaagttttatcagttta
gcagaacttactgtccatcgacggcgaactcacacaggggagaaacctttctcttgctct
gaatgtgggaaatgttttgcctcttcgtcagaacttactgtccatcgacggcaaatccac
acaggggagaaaccattttcttgttctgaatgtgggaaatgttttgcacgtaacagtatt
ctaaaaaaacacttacagattcacacaggggggaaaccataa
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