Xenopus tropicalis (tropical clawed frog): 116406489
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Entry
116406489 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF58.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116406489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116406489
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116406489
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
Zn-ribbon_8
zf-C2H2_11
C1_4
Zn_ribbon_SprT
zf-C2H2_5
Motif
Other DBs
NCBI-GeneID:
116406489
NCBI-ProteinID:
XP_031760218
UniProt:
A0A6I8RIW6
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Position
6:5968462..5982734
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AA seq
737 aa
AA seq
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MDKRRLTSDTQDSRLLKNKEERRRLSAAGYRLVPYGSGITEMNRERREGLGARKQTGSDT
NRKFPTCNGFVARSAHSNQPPVLQKPHAQEMNSAPKAQQNQMPQLCTVTGGKLIVTPKLT
KHTQPDAEEKLHGSQKKRTDISGKNINSTLHQTRKEFPKTTKQKVFPRLFRVINPFVCVK
CKRRFGSNGNLLIHQRIHTERPFSCTDCGKCFSHRTILREHRRAHMGKGPFPHSTGGNKI
SSGKGNFQRHQGASAKGKPLTCTECGKSFKYKSDLRVHERTHTGEKPYVCTQCGKGFSQK
GNLNTHSLSHSTEKPFSCTECGKSFKDTAHLHIHERTHTGEKPYVCTQCGKGFSRKGNLE
THSLIHYTEKLFSCTECGKCFRLKQHLKSHMKTHTGVKDFVCTECGKQFTQKQNLQQHLL
IHTSEKTFVCNVCGKSHSRNEHLKAHLRVHTGEKPFACTECNKSFRVKSRLHAHKMTHTG
VKPFQCKECDQSFTRKENLNAHSLIHSTKKPFICTECGKCFRIKGNLKSHEKTHTGKKDF
ACTECGKRFIDKRGLRQHQWIHTGEKPFVCSECGKGHRRKEQLKAHLCIHTGEKPFACTE
CNKTFRSRGRLNVHKLTHTGLKRFLCNECGKTYKTKSDLNIHHRTHTGEKPYPCAECGRS
FTTKASLHRHSHTHTGIKPYACTECGKCFRNKADLKYHQSAHTGEKPFECTECGKSFSSQ
TVLNIHQKIHATVPLSL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaggcgacttaccagtgatacccaggattcccggctgctcaagaacaaggag
gagaggaggagactcagtgctgctggatacagactggttccatatggatcaggaatcaca
gagatgaacagggagaggagagaagggcttggtgcaaggaagcagacaggaagtgacaca
aacaggaagttccctacatgcaatggctttgttgccagatctgcccacagtaaccaacct
ccggtgcttcagaaacctcacgcccaggagatgaattctgccccaaaagcccaacagaac
caaatgccccaactttgcacagtaactggggggaagctgattgtaacccccaaactaaca
aaacacacacagcctgatgctgaggaaaagctacatggaagtcagaaaaagcgaactgat
atttcaggaaaaaacataaattctactttacatcaaacaaggaaggaatttcctaaaacc
acaaagcagaaggtgtttcctagactgtttagggttataaatccgtttgtctgtgttaag
tgcaagagaaggttcggcagcaatgggaacctcctcatccatcagcgcattcacacagag
agaccgttctcttgcactgattgtgggaaatgtttctcccacagaaccatcctccgagag
caccgccgggctcatatgggaaagggacccttcccccacagcactgggggcaataaaatc
tcatcaggtaagggcaactttcagaggcaccaaggggcgagtgctaaagggaaaccactt
acctgcactgagtgtgggaaatcattcaaatacaagtctgatttgcgcgtacatgaacgc
acacacaccggggagaaaccttatgtttgtacccaatgtggtaaaggcttttcccagaag
gggaatcttaatacacattcacttagtcattctacagagaaaccttttagctgcactgag
tgtgggaaatcattcaaagatacagctcatctgcacatacatgaacgcacacacaccggg
gagaaaccttatgtttgtacccaatgtggtaaaggcttttcccggaaggggaatcttgaa
acacattcacttattcattatacagagaaactttttagctgcacagagtgtgggaaatgt
ttccgtttgaagcaacatctcaaatctcatatgaagactcacactggggttaaagatttt
gtctgtacagagtgtgggaaacagttcactcaaaaacagaacctccaacaacacctgctg
attcacaccagtgagaaaacatttgtgtgtaatgtgtgtgggaaaagccacagccgaaat
gagcatctaaaagctcatctgcgagttcacacaggagagaaaccctttgcctgcacagag
tgcaataaatccttccgagtaaagagtcggctccatgcccacaaaatgactcacactggt
gtgaagccttttcagtgcaaagagtgtgatcaatccttcacaagaaaggagaatcttaat
gcacattcacttatacattctacaaagaaaccttttatctgcacagagtgtgggaaatgt
ttccgtataaagggcaatctcaaatctcatgagaagactcacactgggaaaaaagatttt
gcctgtacagagtgtgggaaacggttcattgacaaacgcggcctccgccaacaccagtgg
attcacaccggcgagaaaccatttgtctgcagtgagtgtggtaaaggccacaggcgtaag
gagcagctaaaagctcatctgtgtattcacacaggagagaaaccctttgcctgcacagag
tgcaataaaaccttccgatcgaggggaaggctaaatgtccacaaactgactcacactggc
ctgaagcgctttctgtgcaatgagtgtggtaaaacttataaaacaaagtcagatcttaac
atccatcatcggacacatacaggagagaaaccctacccctgtgccgaatgtgggaggagt
tttaccacaaaggcaagcttacaccgacacagtcacactcacactgggataaagccatac
gcctgtacagagtgtgggaaatgttttagaaataaggctgatctgaaataccaccaatct
gcccatactggggagaaaccatttgagtgtacagagtgtgggaaaagcttttcatctcaa
acagtgcttaatattcatcaaaagattcatgctacagtaccgctgagcctgtga
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