Xenopus tropicalis (tropical clawed frog): 116407556
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Entry
116407556 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF22-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116407556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116407556
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116407556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_11
KRAB
Raffinose_syn
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
116407556
NCBI-ProteinID:
XP_031748876
UniProt:
A0A8J1IWJ3
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All DBs
Position
9:3268752..3272970
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AA seq
622 aa
AA seq
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MGKKDKNEERKERILNLTLEIIYLLTGEGYVIPKKKSPTVGLGALHAPGSVIQKENDKKI
LELISNIIQLLTGEVAIRCEDVSIYFSLEEWEYIKGNKALYREGRKEEEEPQQLRPLGSE
QPPPANGIKEEAASWEGENQSDCSINPLTEQIQGTDTPTPIMGWSLINNSAEDYISVVVK
EEAASWEGGNHLAEQTQETDTETPMGRSLNSSCFPNDTSDAYMEELLSWGTDHNYCNIST
TTGQTLGVDKLAPIVTGQTLGVDKLAPIVEHPRSHTGEKSFYCSECEKHYSTLSYLNFHQ
IRIHTGEKPFSCSECGKCFFTSSDLLGHQRRTHTGERPFSCYFCGKCFFTLSDLTLHRRR
THTEDKSFSCSQSGKCFFTSSDLIGHRQQIHTGEKPNTCSECGKCFSTSSNLTIHQRQTH
TGEKPFACLQCGKCFSYKSRLKDHQITHTREKPFSCSECGKCFSNQSLLKTHHRTHTGEK
PFSCPECGKCFSVQSRLKDHQRIHTREKSFSCSECGKCFSNQSQLKTHYRTHTGEKPFSC
SECGKCFSHRSHLKTHHRTHTGEKPYSCCECGKCFATSSQLTVHQRRIHTGKKPFSCSEC
GKCFARNSILIKHLQIHRGGKP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaggataaaaatgaggagcggaaggagagaatcctgaatctcacactggag
attatctatctgctgactggagagggctacgtcatccctaagaagaagagcccaactgtg
ggtttgggggccctgcatgcccctggctccgtcatacagaaggaaaatgacaagaagatc
ctggaactcatctccaacatcatccagctgctgactggagaggttgccataaggtgtgag
gatgtttccatctatttttccttggaggagtgggagtatataaaaggaaacaaggccctt
tacagggaggggagaaaggaggaggaggagccccagcagctccgcccactgggatcggaa
cagcccccaccggccaatgggattaaagaggaggcggcttcatgggaaggggaaaaccaa
tcagattgcagcattaatccccttacagaacagatacaaggaacagacacgcctactcct
atcatggggtggagcctgattaacaattcggcagaggattatatatcagttgttgttaaa
gaggaggcggcttcatgggaagggggaaatcaccttgcagagcaaacacaagaaacagac
acagagacgcccatggggcggagcctgaatagcagctgcttccctaacgatacatcagac
gcctatatggaggaattactttcatggggaacagaccataattactgcaacataagtaca
actacaggacagacactgggagtagataaattagctccaattgttacaggacagacactg
ggagtagataaattagctcctattgtggagcatccgagaagtcacacaggagagaaaagt
ttttattgttctgaatgtgagaaacattattccacattatcataccttaacttccatcaa
atacgaatccacacaggggagaaacctttttcttgttctgaatgtgggaaatgttttttc
acttcatcagaccttcttggccatcaacgacgaacccacacaggggagagacccttttcc
tgttatttttgtgggaagtgttttttcactttatcagaccttactctccatcggagacga
acccacaccgaagacaaatcgttttcttgttctcaatctggaaaatgttttttcacttca
tcagaccttataggccatcggcaacaaatccacacaggggagaaaccaaatacttgttcc
gaatgtgggaaatgtttctctacttcatcaaaccttactatccatcaacgacaaacccac
acaggggagaaaccatttgcttgtttgcagtgtgggaaatgtttttcatacaaatcacgc
cttaaagatcatcaaataacccacacaagggaaaaacctttttcttgctctgaatgtgga
aaatgtttttcaaaccaatcactccttaaaactcatcacagaacccacacaggggagaaa
cctttttcttgtcctgaatgtgggaaatgtttttcagtccaatcacgccttaaagatcat
caaagaatccacacaagggaaaaatctttttcttgttctgaatgtgggaaatgtttttca
aaccaatcccagcttaaaacccattacagaactcacacaggggagaaaccattttcttgt
tctgaatgtgggaaatgtttttcacaccgatcccaccttaaaactcaccatagaactcac
acaggggagaaaccgtattcttgttgtgaatgtgggaaatgttttgccacttcgtcacaa
cttactgtgcatcaacgacgaatccacacaggaaagaaacctttttcttgttctgaatgt
gggaaatgttttgcacgtaacagtattctaataaaacacttacagattcacagagggggg
aaaccataa
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