Xenopus tropicalis (tropical clawed frog): 116407577
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Entry
116407577 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF7.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116407577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116407577
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116407577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
KRAB
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
116407577
NCBI-ProteinID:
XP_031748948
UniProt:
A0A8J1ITN8
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All DBs
Position
9:complement(3950927..3960912)
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AA seq
402 aa
AA seq
DB search
LHAPGSVIQKENDKKILELISNIIQLLTGEVAIRCEDVSIYFSLEEWEYIKGNKALYREG
IKEEEEPQQLRPLAACEYKDGSDVTAHTEATLCCNNDGNLTNPDVSPAEQPPPANGMKEE
AASWEGGNQSDCSINPLTEQIQGTDTPAPIMGCSLNNSSAVNYASKEVKEELIYSCEGGN
QSDCSIDPLTDQIQGTNTPIMGSSQNTLQMTGNNHDENSHQSPHKSHITNNKLHRKYSCN
ETHKGEKPFLCSQCGKCFSHQFELKVHYGTHTGEKPFSCSECGKCFSTQSQLKRHQRTHT
GEKPYPCPECEKCFSRKLSRDCHQRIHTGEKPFSCSECGKCFSDQSHLKTHHRTHTGEKP
FSCSECGKCFVKKSNLQSHQRTHTGEKPFSLNEGNDLHGTVV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ctgcatgcccctggctccgtcatacagaaggaaaatgacaagaagatcctggaactcatc
tccaacatcatccagctgctgactggagaggttgccataaggtgtgaggatgtttccatc
tatttttccttggaggagtgggagtatataaaaggaaacaaggccctttacagggaaggg
ataaaggaggaggaggagccccagcagctccgcccactggcagcctgtgagtataaagat
gggagcgatgttacagcacatacggaagcaactttatgttgtaataatgatgggaatctc
acaaaccctgatgtttctccagcggaacagcccccaccggccaatgggatgaaagaggag
gcggcttcatgggaagggggaaaccaatcagattgcagcattaatccccttacagaacag
atacagggaacagacacacctgctcctatcatggggtgcagcctgaataacagctcggca
gttaattatgcatcaaaggaggtaaaggaggagttaatttattcatgtgaagggggaaac
caatcagattgcagcattgatccccttacagaccagatacagggaacaaatactcctatc
atggggagcagccagaataccttacaaatgacgggtaataatcatgatgaaaattcccac
caatctccacacaaatctcacataacaaacaataaattacataggaaatacagctgcaat
gagactcacaaaggggagaagccatttttatgttctcaatgtgggaaatgtttttcccac
caattcgaattgaaagttcattatggaacccacacaggggagaaaccattttcatgttct
gaatgtgggaaatgtttttcaacccaatctcaactcaaacgtcatcaaaggactcacaca
ggggagaaaccatatccttgtcctgaatgtgaaaaatgtttctcaaggaaactttctcgt
gattgtcatcaaaggatccacacaggggagaaaccattttcttgttctgaatgtggaaaa
tgtttttcagaccaatcccaccttaaaactcaccatagaacccacacaggagagaaacca
ttttcatgttctgaatgtgggaaatgttttgtaaaaaaatctaatctacaaagtcatcaa
aggactcacacaggggagaagccattttctctaaatgagggcaatgatttgcatggaaca
gttgtctaa
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