Xenopus tropicalis (tropical clawed frog): 116407990
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Entry
116407990 CDS
T01011
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
116407990
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Gene silencing
Transposable elements
116407990
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
116407990
NCBI-ProteinID:
XP_031750454
UniProt:
A0A8J1IXX3
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All DBs
Position
10:6488221..6494052
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AA seq
503 aa
AA seq
DB search
MEEDIVVPVLCAVIYALEQWEEESQEGRDQEEPQQGRLEEPQEGRDQEEPQQGRLEEPQE
GRHQEEPQQGRLEEPQEGRDQEEPQQGRLEEPQEGRDQEEPQEGRDQEEPQEGREQEEPQ
QGRLEEPQEGRDQEEPQEGRDQEEPQEGRDQEEPQEGREQEEPPVPVPRVRIRRSRQFWR
AVPSFGELSDDEVLRMYPLSRAAILQVFDLVRWDLDPVTARSQALPGICKLLAVLHFLGS
GSFQQVSAHLAGMSQPTFSRILTQVLRALLPHSQRLISFPSTEAEWTGVKQDFYLIGRFP
NCLGAIDCTHVPLTPPRAHRERYRNRERSHSINVQVVCDSHLRIMSVRSGFPGSVHDAHI
LRQSALYERFTQGEMPRGWLVGDAGYGVLPWLMTPIRFPRTPAQRRYNRAHRKTHKVTQR
LFGALKSRFRCLSVNGGALLYSPIKVSEIIIVCAMLHNVALQHGLPADIDDHLEPEIEGY
VGRRWDNRQGRRVRNQLIASRFR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatatcgtagttcctgtactgtgtgctgtcatttatgctttggagcaatgg
gaagaggagtcccaagaggggagggaccaagaggagccccaacaagggaggctagaggag
ccccaagaggggagggaccaagaggagccccaacaagggaggctagaggagccccaagag
gggaggcaccaagaggagccccaacaagggaggctagaggagccccaagaggggagggac
caagaggagccccaacaagggaggctagaggagccccaagaggggagggaccaagaggag
ccccaagaggggagggaccaagaggagccccaagaggggagggaacaagaggagccccaa
caagggaggctagaggagccccaagaggggagggaccaagaggagccccaagaggggagg
gaccaagaggagccccaagaggggagggaccaagaggagccccaagaggggagggaacaa
gaggagccccccgtccctgtgccacgtgttaggatcagacggtctcgccaattctggagg
gctgtcccttcctttggcgagctgtctgatgatgaggtgctgcggatgtaccccctgagc
cgcgccgccattttgcaggtgtttgacctagttagatgggatctagatcctgtgacggcg
cggtctcaggcgctgcccgggatttgcaagctgcttgcggtcctgcatttcctgggcagc
ggtagtttccaacaggtctccgcgcacctcgccggtatgagccagcccaccttcagccgc
atcctgacgcaagtgctccgggcgcttctgccgcactcgcagaggctcatttcctttccc
tcaaccgaggcagagtggacaggggtaaagcaagacttttacctcattggccgttttcca
aattgcctgggagccattgattgcacccatgttccgctcacaccgcctcgggctcaccgg
gagcgctaccgtaaccgcgagcgctcccattccatcaacgtccaggtggtgtgcgattcc
cacctgcggatcatgagtgtgagatctggctttcccggaagtgtccacgatgcccatatc
ctgcgtcagtcggccctctacgagcgcttcacccaaggagagatgccccggggctggctg
gtgggagacgcaggatacggggttctgccctggctgatgacccccatacgttttccccgc
acacctgcccaacgtaggtacaaccgtgcccatcggaagacgcacaaggtcacccagcgc
ctgtttggggcgctcaagtcgcgcttccgatgcctctcagtcaatgggggagcccttctt
tattcccccattaaggtttcagagatcatcattgtctgcgccatgttgcacaatgtggca
ctgcagcacggcctacccgcagacattgatgatcatctggaacctgagattgaggggtac
gttggcaggcgctgggataaccgacaggggagaagagtgcggaatcagctcatcgcctcg
cgctttcgttag
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