Xenopus tropicalis (tropical clawed frog): 116409471
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Entry
116409471 CDS
T01011
Symbol
sox30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116409471 (sox30)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116409471 (sox30)
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
UPF0193
Microp_apicomplexa_13
Motif
Other DBs
NCBI-GeneID:
116409471
NCBI-ProteinID:
XP_031753986
UniProt:
A0A803JZU5
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Position
3:complement(25092384..25097609)
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AA seq
439 aa
AA seq
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MHTLAVIPKKETDSNSKEMSLNIPPSETDMATSSFISKKNGRIKRPMNAFMIWARIHRQM
IARSKPDLCNKDISIHLGYEWRKLTEEQKKPYYDEAFKLDRQHQALFPDWKYEPKRWNKK
YSDESAQMPSFSQCKESQTLVHESKIPALVCNQPLNDTHDRGGKLQHNNDPFSNQQPNQI
PVPPTRTKPTGVLALTHKPRTSAICSSSQAESTFPNNGGGKLKQNNDPLSNQQPNQIPVP
PTRVRQPARQVDQALNPENSSQANRNNQCLTNSVHGNFLVPDLHVNRGYHRDPSSALPTP
MPIHPTMASLPFYPGHAYPLYYLGFSDYCTSPPYFEYYHAFHPSGPHFLPLSTCLLCHRL
PEYRPTMPQCQSYLGGFHPQPETSFSGLNRDFGYLSLVQQGVMGESESSTYIQAQAPFYS
QNIHVVDREVEGPSVLQML
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcatacattagcagttatcccaaaaaaggaaacagatagcaatagcaaagagatgtct
ctcaatatccctccatctgagacagatatggccacttcaagtttcatcagcaaaaaaaat
gggcgcataaaacgtcctatgaatgcatttatgatatgggccaggattcaccgccaaatg
attgcacggtcaaagccagatctctgcaacaaagatatcagcattcatttaggatatgaa
tggcgaaaactaacagaggagcagaaaaagccttattacgacgaggccttcaaattagat
agacaacaccaggcattgtttccagactggaaatacgagccaaaacgttggaacaaaaaa
tactcggacgagtccgctcaaatgcccagcttttctcaatgcaaagaaagtcaaacactg
gtacatgagagcaaaatacctgccttggtatgcaatcagccacttaatgacacacacgac
agaggaggaaagttacagcacaataatgatccattctccaatcagcaaccaaatcagata
ccggtgcctcccaccaggactaagccaaccggggtcctggcgctcacacataaacctcgt
acttcagccatatgcagttcatcacaagcagaatctacatttcctaacaatggaggagga
aagttaaagcaaaataatgatccactctccaatcagcaaccaaatcagataccagtgcct
cccacaagggttaggcagcctgcaaggcaggtagatcaggccttgaacccggagaattca
tcacaagccaaccgtaataaccaatgcctgactaattcagtacatggcaacttccttgtt
cccgatctccatgttaacagaggatatcacagggatccttcaagtgccttgccaacaccc
atgcctatccatcctactatggcttccctccctttctatccaggccatgcttatccactt
tattatttaggattttctgactattgtaccagtcctccatattttgagtactaccatgcc
tttcatccatctggacctcatttccttccactcagcacctgcctgctttgccatcgtcta
cctgaatacaggcccactatgccacaatgccagagctatttgggaggatttcatccacag
cctgaaacatcatttagtggtctgaatagagactttggttacctgtcacttgtccagcaa
ggagtcatgggagaaagtgaaagcagcacctacattcaagcacaagcacccttttactct
cagaacatccatgtggttgacagagaagtggagggacccagtgttttgcagatgctgtag
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