Xenopus tropicalis (tropical clawed frog): 116409531
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Entry
116409531 CDS
T01011
Name
(RefSeq) transcription factor SOX-30-like
KO
K09271
transcription factor SOX15/30
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116409531
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116409531
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
UPF0193
Motif
Other DBs
NCBI-GeneID:
116409531
NCBI-ProteinID:
XP_031754050
UniProt:
A0A8J1JAK8
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Position
3:24992648..25002702
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AA seq
352 aa
AA seq
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MHTLAVIPKKETDSNSKEMSLNIPPSETDMATSSFISKKNGRIKHPMNAFMIWARIHRQM
IARSKPDLCNKDISIHLGYEWRKLTEEQKKPYYDEAFKLDRQHQALFPDWKYEPKRRNKK
YSDESAQMPSSSQCKESQTLVHESKIPALVCNQPLNDTHDRGGKLQHNNDPFSNQQPNQI
PVPPTRTKPTGVLARTHKPRTSAICSSSQAESTFPNNGGGKLKQNNDPLSNQQPNQIPVP
PTRVRQPARQVDQALNPENSSQANRNNQCLTNSVLGNFLVPDRHVNRGYHRDPSSALPTP
MPIHPTMAFLPFYPGHAYPLSYLGFSDYCTSPPYFEYYHAFHTSGPHFLPLR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcatacattagcagttatcccaaaaaaggaaacagatagcaatagcaaagagatgtct
ctcaatatccctccatctgagacagatatggccacttcaagtttcatcagcaaaaaaaat
gggcgcataaaacatcctatgaatgcatttatgatatgggcaaggattcaccgccaaatg
attgcacggtcaaagccagatctctgcaacaaagatatcagcattcatttaggatatgaa
tggcgaaaactcacagaggagcagaaaaagccttattacgacgaggccttcaaattagat
agacaacaccaggcattgtttccagactggaaatacgagccaaaacgtcggaacaaaaaa
tactcggacgagtccgctcaaatgcccagctcttctcaatgcaaagaaagtcaaactctg
gtacatgagagcaaaatacctgccttggtatgcaatcagccacttaatgacacacacgac
agaggaggaaaattacagcacaataatgatccattctccaatcagcaaccaaatcagata
ccggtgcctcccaccaggactaagccaaccggggtcctggcgcgcacacataaacctcgt
acttcagccatatgcagttcatcacaagcagaatctacatttcctaacaatggaggagga
aagttaaagcaaaataatgatccactctccaatcagcaaccaaatcagataccagtgcct
cccacaagggttagacagcctgcaaggcaggtagatcaggccttgaacccggagaattca
tcacaagccaaccgtaataaccaatgcctgactaattcagtacttggcaacttccttgtt
cccgatcgccatgttaacagaggatatcacagggatccttcaagtgccttgccaacaccc
atgcctatccatcccactatggctttcctccccttctatcccggccatgcttatccactt
tcttatttaggattttctgactattgtaccagtcctccatattttgagtactaccatgcc
tttcatacatctggacctcatttccttccactcaggtaa
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