Xenopus tropicalis (tropical clawed frog): 116410870
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Entry
116410870 CDS
T01011
Name
(RefSeq) zinc finger CCHC domain-containing protein 3-like
KO
K27162
zinc finger CCHC domain-containing protein 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116410870
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Gene cluster
GFIT
Motif
Pfam:
RBD_ZCCHC3_2nd
RBD_ZCCHC3_1st
zf-CCHC
Myb_CC_LHEQLE
Motif
Other DBs
NCBI-GeneID:
116410870
NCBI-ProteinID:
XP_031758087
UniProt:
A0A8J1JJP4
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Position
5:6645566..6652564
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AA seq
470 aa
AA seq
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MSDPAGRRVETRLGSSRRAAGAAAITDSAAAQKAMLIGRKKRPARKASLRKVQTSSPGCV
GASARGIQAGVPAGSCGTEAWEEQEAGAMTSGTGEQERGSMEVPGAAGESPVAMEVAESA
LSEEPNMAAGPQTEVAEPGKRRNVVKIKWVQGREGFPGRRYVARRLIKETLGFTPDDVYA
LVTVTDTEFDLSFKLPQGLEEFWKGYERERGSDVWNGFEVIPVSKPEVKNVTIIFKSESI
NEEDVMFWLKRQCQVLSPLKRIYDEEGFWIGGWKVQVRLHSHLHVQKHLPNSLFLGKDRG
VCFYVGQPRVCFKCGSNRHLAGKCTVQKCAFCGEVGHPSKDCVTIRCNLCLKLGHAHRDC
PNAWHNVQKQCPNLLAELGEGMGGEEGPETQAAAQRGTEGGTDLGNGGSTSGEGVELTER
EEQGAEKQDWRVVGGNSKKVNKRKAVPKEMATKNAVWLWGSLTPADLNAG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccagcgggtaggagagtggagacccgcttgggttctagcaggagggctgca
ggagcggcggccataacagacagcgctgctgcacagaaagctatgctgattggaagaaag
aagcgaccggcacgtaaggcctcacttagaaaagttcaaactagctcacctggctgtgtg
ggagcgtctgcccggggaatccaggccggcgtgcctgcgggaagctgcgggacggaggcc
tgggaggaacaggaagcaggcgccatgacctctgggaccggtgagcaggagagaggcagc
atggaggtgccgggagcagcgggggagagccctgtcgctatggaagttgctgaaagtgca
ctgagtgaggagcccaacatggccgccggcccacagactgaggtggcagagccgggcaag
aggaggaacgtagtgaagattaagtgggtgcaggggagagaggggttcccgggcaggaga
tacgtagccaggaggctgatcaaggagaccctgggtttcaccccagatgatgtttatgcc
ctagtcactgtcactgatacggagtttgacctgagctttaagttgccccaggggctggag
gaattttggaaggggtatgagagagagaggggctcggacgtgtggaacggatttgaggtt
attccggtttcaaagccggaggttaaaaatgtgacaattatttttaaaagcgagtccata
aatgaggaggatgtgatgttttggctaaagcggcagtgccaggtactctcccctttaaag
agaatctatgatgaagagggtttttggataggggggtggaaggtccaggtgagactgcac
tctcatctccatgtgcagaaacatctccccaactctctgtttctagggaaggacaggggg
gtgtgtttctatgtgggccagccccgggtctgctttaaatgcggctccaataggcatctg
gccggcaaatgtaccgtacagaaatgtgccttttgtggggaggtgggacacccaagcaag
gactgtgtcaccattaggtgcaatctctgcctgaaactgggccacgcacaccgggattgc
cccaacgcctggcataacgtccagaaacagtgcccaaacctgctagcggaactgggggag
ggtatggggggcgaggagggaccggagactcaggcagcagcgcaaagggggactgaggga
ggaacagatttggggaacggaggaagtacttctggggaaggggtggagctcactgagagg
gaggagcaaggggcggagaaacaggattggcgggtggttggtggaaactcaaagaaagta
aataagagaaaggctgtgcccaaagagatggcgactaaaaatgccgtctggttgtggggg
tcactgaccccggctgatttgaacgccggttga
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