Xenopus tropicalis (tropical clawed frog): 116411613
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Entry
116411613 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF26.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116411613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116411613
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116411613
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf_UBZ
zf-LYAR
zf-C2H2_6
Zn-ribbon_8
zf-C2H2_11
DUF6434
C1_4
Motif
Other DBs
NCBI-GeneID:
116411613
NCBI-ProteinID:
XP_031760091
UniProt:
A0A8J1JU28
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Position
6:complement(5187343..5192756)
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AA seq
628 aa
AA seq
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MKENLSSVKNEMDLQSGSGFPEADPEILQIKIKEEEPDCDYQDPVESSAVPLTDAGSLKT
EDKVKSEDEESDTEDHVTVLKREMDSVPGAENCIRNGNNSDPEAPRLWHRDQSPPRQGTS
DCSDALKAANGQTEDAGVLPGSTQEKTPSDLECESGTNYENYSAGSEASGFICNKCGENF
AVKRDFLTHMCTENGRNNGSDKECVETERIVGQQLGRTREKPFKCTDCGRSFSHKRTLTA
HQRNHSGERRFKCTECGKSFFHKSNLVNHQIIHTGKKHFTCTECGKWFSHKRTLYTHQKN
HSAERRFKCPECGKSFFYKSNLRSHQKLHTGEKPFSCGECGKCFSQKGTLQRHEQIHTGV
KPFTCTDCGKSFYDKHNLWKHQNIHTENKAFACTEPGFICCTCGQSFSFDSDLLSHHCTQ
SGNYHVCNSSAVENGDGKQYSHKSNLHRPRLVKPQKEMFPCTECGKSFSGKSSLHAHQRI
HTGEKPYTCSDCGKSFSQSCHLRRHQNIHTGEKPFKCVECGKSFNVQSNLQSHKKIHLGV
KPYACMECGKVFSLKGNLNKHQRIHTGEKPFTCAACGKSFFKKICLLNHQKTHTGEKPFT
CTECGKRFSQKSSLQKHQNSHREGNFPP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaacctgagctcagtgaagaacgagatggacttacaatctgggagtggcttc
ccagaggcagatccagaaatattacagataaagataaaggaggaagagccggactgtgac
tatcaggacccagtggaaagctcagcagttccacttacagatgcgggttccctaaagacc
gaggataaagtgaaatcagaggatgaggagtcggacacggaggatcatgtgactgtactg
aagagagagatggattctgttcctggggccgagaattgcatccgtaatggaaataatagt
gaccctgaggctcccagactttggcaccgggaccagagcccaccaaggcaaggaacaagt
gattgctccgatgcactgaaagcagccaatgggcagacagaagatgctggagtattgccg
gggtcgacacaagagaaaacgcctagtgacttggagtgtgaatccggcacaaattatgag
aattactctgcaggttctgaagcgtcgggttttatttgcaataaatgtggagaaaacttt
gctgtgaagagagatttcctcactcacatgtgtaccgagaatgggagaaataacggttca
gataaggaatgtgtagaaacagaaaggattgtgggacagcagttgggccgtacaagggag
aaaccattcaaatgtacagattgtgggaggagtttttctcacaaaaggacactgaccgcc
caccagagaaatcactcgggagagagacgattcaaatgtacagaatgtgggaaaagcttc
ttccacaaaagcaacctcgtcaaccaccagatcattcacacaggcaagaaacatttcacc
tgtacggaatgtggcaaatggttctctcacaaaaggactctctacacccaccagaaaaat
cacagcgcagaaaggcgcttcaaatgccccgagtgcggcaagagtttcttctataagagc
aacctccgcagccaccagaagctgcacacgggggagaaaccgttctcttgcggggaatgt
ggcaaatgcttctctcagaaaggcaccctgcaaaggcacgagcagattcacacgggggta
aaaccattcacgtgcacagactgcgggaagagtttctacgataagcacaacctctggaaa
caccagaatattcacacagaaaataaagcctttgcgtgtacagaaccgggcttcatctgc
tgtacctgtgggcaaagcttctctttcgatagcgaccttctcagtcatcactgtacccag
tctggtaattatcacgtttgtaactcgtccgcagtggagaatggagacggcaagcagtac
agccataaatctaaccttcacaggcctcgcttggttaaaccacagaaagaaatgttccca
tgtacagaatgtggcaaaagcttttctggaaaaagcagcctccatgctcatcagagaatc
cacactggggagaaaccctacacctgctcagactgtgggaaaagcttctctcagagttgt
caccttcgaaggcaccagaacattcacacaggagaaaagcctttcaaatgcgtggaatgt
gggaaaagcttcaacgtgcagagcaacctgcaaagccacaagaaaatccacttgggggta
aaaccctatgcatgcatggaatgtgggaaagtgttttccctaaaaggtaatctcaacaaa
caccagagaatccacacaggggaaaagccatttacatgcgcagcctgtgggaaaagcttc
tttaaaaagatctgccttctcaatcaccagaaaactcacaccggggagaaaccattcacc
tgcactgaatgtggcaaacggttctctcagaagagcagccttcagaaacaccagaacagc
cacagagaggggaatttccccccgtga
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