Xenopus tropicalis (tropical clawed frog): 116411615
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Entry
116411615 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF26.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116411615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116411615
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116411615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf_UBZ
zf-C2H2_6
Zap1_zf1
C1_4
zf-C2H2_jaz
zf-C2H2_11
Zn-ribbon_8
zf-LYAR
zf-H2C2_5
Elf1
Motif
Other DBs
NCBI-GeneID:
116411615
NCBI-ProteinID:
XP_031760116
UniProt:
A0A8J1JU47
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Position
6:4432508..4436004
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AA seq
545 aa
AA seq
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MDPVPGAGSPEPQPQMLQIKKEEPDPEDHQTPMESSAAPLTDGDVDLTHGDERDLVNSKS
LLPQCNSLARESGDASPNTPKVPLQGPTQHRLSLNHKAAGPETSGVICCNYGKCFGSDSG
NQCAAVYQREHAPPICTQRGFNHDALLGLQIPRLLHTGEKPFSCTECGKSFCHKSSLIAH
ERAHKGEKPFTCAECGRSFTIKNRLTKHQKMHSGEKPFVCSECAKTFSIKEELQKHMWMH
SGEKPFACTECGKCFPLKNRLTAHQRTHTAEKPFTCTECGISFSLKSRLNIHQRIHTGEK
PFTCTECGKSFSMKNKLQKHVRIHTGEKPFTCTECGRSFSLKSRLIAHQRIHTGEKPFTC
KECGKSFSLKKGLQKHLPMHTGEKPYACTECGRSFSLNCSLRRHQMVHTGEKPFHCKECG
KSFSIKNDLQKHVRIHTGEKPFTCTQCGKCFSQKSNLQSHSKTHTGEKPFTCPQCAKCFS
HKCSLRKHQKSHSNPKPPIEKPFQCGQCGRGFSYKFTLRKHQKIHVTPQSARDSQEPPMH
FVSCS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgttcctggggccggttccccagagccacaaccacaaatgttacagataaag
aaagaagaaccggaccctgaggaccatcagaccccaatggaaagctcagcagcgccactt
actgatggggatgttgacttgactcatggggatgaacgggatcttgttaactccaaatca
ttgttaccccaatgtaattctctagcacgtgaatctggtgatgcttctccgaataccccc
aaggtgccgctccaagggccaacccagcacagactgagcttgaaccataaagctgctggc
ccagaaacatcgggggttatttgctgtaactatgggaaatgctttgggtcggatagtggg
aaccaatgcgctgctgtgtatcagagggaacatgccccgcccatttgcacccagcggggg
tttaaccacgatgcactgctcggcctccagattcctcggctgttgcacaccggggagaaa
ccattctcctgcacagagtgtgggaaaagcttttgtcacaagagctcccttatagcccat
gagagggctcacaaaggggagaaaccattcacgtgtgcagaatgtgggaggagtttcact
ataaagaaccgactcaccaaacaccagaaaatgcactcgggggagaaaccctttgtgtgt
tcagaatgtgcgaaaacattttccataaaggaggagcttcagaaacacatgtggatgcac
tcgggggagaaaccatttgcctgtactgagtgtgggaaatgtttccctttaaaaaacaga
ctaactgcacaccagagaactcacacagcggaaaaaccattcacctgcacagaatgcggc
atcagtttctccttaaagagccggctcaacattcaccagagaattcacacaggggagaaa
ccattcacctgcacggaatgtgggaaaagcttctctatgaagaacaaacttcagaaacac
gtgaggattcacacgggggagaaaccattcacctgtacggaatgtgggaggagtttctcc
ttaaagagccggctcattgctcatcagaggattcacacgggggagaaacccttcacatgc
aaagagtgtgggaaaagcttctctctaaagaaaggtcttcagaaacacctgccaatgcac
acgggggagaaaccctacgcgtgcacggaatgtgggaggagcttctctctgaactgtagc
cttcgcaggcaccagatggtccacaccggggagaaaccctttcactgcaaagagtgcggg
aagagcttctccataaagaacgaccttcagaagcacgtgaggatccacacgggggagaaa
ccattcacttgcacacagtgcggcaaatgcttctctcaaaagagcaacctccaaagtcac
agtaagacccacacaggggagaaaccattcacctgcccccaatgtgccaagtgcttctcc
cataagtgcagcctgcgcaaacaccagaagagccacagcaaccccaagcctcccatagag
aagccgttccagtgcggccagtgtgggaggggcttctcttacaagttcaccctccggaaa
caccagaaaatccatgtaacgccgcagtcggctagagactcccaggaaccccccatgcac
tttgtatcctgttcttag
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