Xenopus tropicalis (tropical clawed frog): 116411617
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Entry
116411617 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF26.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116411617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116411617
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116411617
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf_UBZ
Zn-ribbon_8
C1_4
zf-LYAR
zf-C2H2_6
zf-C2H2_11
zf-RING_15
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
116411617
NCBI-ProteinID:
XP_031760130
UniProt:
A0A8J1JSY5
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All DBs
Position
6:4493321..4498641
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AA seq
494 aa
AA seq
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MEPRRLEGKWENEEPDTEEPLPTIKREMDPVPGAASPLAESEILQIKVKEEEPDSADHQI
PMEILAVPITDGGRCLTSGNRCEISRLRPGDPFPEAEPGAMYGECSERPELLGFICCYCG
TSISGSSAQGHLLTCSVGISRRGSDGRVKPFMCNKVSPTEKPFRCSGCASQFSHRSSLRV
HERVHTAEGLFPCTECGKVFYRKGNFLAHRRIHTAETPFPCPECGKSFSQKSNLLAHERI
HTGVKPFTCSECAKSFAVKSSLLSHQKVHTGEKPFTCGECSKQFSHSYQLRIHLSAHTGV
DPFPCTECGKTFTLKYRLTKHQRTHTGEKPFRCTECGKCFSIKNELQKHQRIHTGEKPFM
CADCGKSFTLKDRLNKHRRVHTGERPFKCLECGNRFSAKHGLLKHQRSHTGEKPFTCSEC
GKSFAQKSTLEIHERIHTGERPFKCNDCGKNFIHSTNLHSHQKIHTGEKPFTCAECGKSF
SLRNKLVRHQKIHK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaggaggttagaggggaaatgggagaatgaagagccggacactgaggagcct
ctgcccacaataaagagggaaatggatcccgttcctggggccgcttccccattggctgaa
tcagaaatattacagataaaggtaaaggaggaagaaccggactctgcagatcatcagatc
ccaatggaaatcttggccgttcccattactgatgggggtaggtgcttgaccagtggaaac
cgctgtgaaatttccagactgcgaccaggtgacccattccccgaggcggagcccggcgct
atgtacggcgagtgctcagagagacctgaattactgggttttatttgctgttattgtgga
accagtatctcaggcagcagcgcacaggggcacctactgacttgtagtgtcggaatctca
cgcaggggaagcgacgggcgagtgaaaccatttatgtgcaacaaggtttccccgacagag
aaaccattcaggtgcagcggatgtgccagtcagttttcccataggagcagcctgcgggtc
cacgagagagttcacacggcggaggggctgtttccatgtacagaatgtggcaaagtcttt
tatcgtaagggcaacttcctggcacaccggagaatccacacggctgagacgccgttcccg
tgcccggaatgtggcaagagcttttcccaaaagagcaatctgctggcgcacgagcggatt
cacacgggggtcaaacccttcacgtgttccgagtgcgctaaaagctttgccgtaaagagc
agcctcttgtcccaccagaaggtgcacacgggggagaaaccattcacctgcggcgaatgc
agcaaacagttctctcacagttaccagctccggatacatctcagcgctcacaccggcgtc
gaccccttcccctgcaccgagtgcggcaagactttcactctaaagtacagactgaccaag
caccagagaacccacaccggggagaaaccctttagatgcacagaatgtggcaaatgcttt
tctattaaaaacgagcttcagaaacaccagagaatccacaccggggagaaacccttcatg
tgcgcagactgcgggaaaagcttcactctaaaggaccggctcaacaagcaccggagagtt
cacaccggggaaagacccttcaaatgtctggaatgcggcaaccgtttctcggcaaaacac
gggcttctgaaacaccagaggtcccacacgggggagaaacccttcacctgcagcgagtgc
gggaaaagcttcgctcagaagagtacgttggagatccacgagagaattcacacaggcgag
agaccgtttaaatgcaacgactgcggaaagaatttcattcatagcactaacctgcacagc
caccagaaaatccacaccggggagaaaccattcacctgcgccgagtgcggcaaaagcttc
tctttgagaaacaaacttgtcagacaccagaaaatccacaaataa
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