Xenopus tropicalis (tropical clawed frog): 116411618
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Entry
116411618 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF26.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116411618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116411618
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116411618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf_UBZ
zf-met
zf-C2H2_11
zf-LYAR
Zn-ribbon_8
DNA_RNApol_7kD
FYDLN_acid
ROS_MUCR
BDHCT_assoc
zf-C2H2_3rep
CpXC
zf-C2HE
C1_4
PknG_rubred
Motif
Other DBs
NCBI-GeneID:
116411618
NCBI-ProteinID:
XP_031760135
UniProt:
A0A8J1JSY7
LinkDB
All DBs
Position
6:4668085..4671160
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AA seq
453 aa
AA seq
DB search
MLQIKKEEPDPEDHQTPMESSAALLSGLGSPEPQPEILQVKKKEPDPEDHQTLMESSAAP
LTDGALSCLLLLGRYMKAEPNLDSAELPKPETDSESGTRDGDCLTSSDGSGFICYKCGET
FTVNSHLLTHLCGYQRKINSGEKLFSCTECGKKFSLFPSLVTHKRIHAGEKPFTCIECGK
TFNRKDNLHTHKKLHTEQHPFTCTECGKRFSLAKRLQRHQMIHKEKDPVTCTECGKSFTS
EKGLKSHKMIHMESDPVTCTECGKSFISEKRLQIHQMIHMEKVQFTCTECGKSFTSQRDL
RTHQVIHMEENAITCTECGKRFTSKRNLKTHQMSHMGKEPITCTECGKSFTSMSSLRVHH
RTHTGEKPYPCTKCRKCFSDRSSLQKHEMAHKNNPYVCSECDRMFPDMIKLRLHQAVHTC
SKCEVCGKCFPQKSSLKNHIGEKPFSCTECGKT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttacagataaagaaagaagaaccggaccctgaggaccatcagaccccaatggaaagc
tcagcagctctgctttctggtttgggttccccagagccacagccagaaatattacaggta
aagaaaaaagaaccagaccctgaggaccatcagaccctgatggaaagctcagcagcgcca
cttactgatggggctctctcctgtttgttgttattagggaggtacatgaaggcggaaccc
aatttagactctgctgaactgcccaaaccagagactgactcggagtccggcacaagagat
ggcgattgcttaacaagctctgatggatcaggttttatctgctataagtgtggggaaacc
ttcactgtgaatagccatcttctcacccacctctgtgggtatcaaaggaaaatcaactcc
ggagagaaactattcagctgtacagagtgtgggaaaaaattctctttattccctagtttg
gttactcacaagagaatccacgcaggggagaaaccattcacctgtatagaatgtgggaaa
acatttaataggaaggacaacctacacacgcacaagaaacttcacaccgagcagcaccca
ttcacctgtacggaatgtgggaaaagattttctttagcgaaaagactccaaaggcaccaa
atgattcacaaggaaaaggatccagtcacttgcacagaatgtgggaaaagctttacttca
gagaaaggactcaaaagtcacaaaatgattcacatggaatcagacccagtcacctgtacg
gaatgtgggaaaagctttatttcagagaaaaggctccaaattcaccaaatgattcacatg
gaaaaggtccaattcacatgtacagaatgtgggaaaagctttacctcacagagagacctc
agaactcaccaagttatacacatggaagagaacgcaatcacctgtacggaatgtgggaaa
agatttacttcaaagagaaacctcaaaactcaccaaatgagtcacatgggaaaggagcca
atcacctgtacggaatgtgggaaaagctttacctcaatgtccagtcttcgtgtacatcac
agaactcacacaggggagaaaccatacccctgtacaaaatgcaggaaatgtttttctgat
cggagcagtctccagaaacatgaaatggctcacaaaaacaatccctatgtatgtagtgag
tgtgatagaatgtttcctgatatgataaagctccgcttgcaccaggccgttcatacgtgt
tccaaatgtgaagtatgtgggaaatgttttcctcagaagagctctcttaaaaatcacata
ggggagaaaccattcagctgcacagaatgtgggaaaacataa
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