Xenopus tropicalis (tropical clawed frog): 116411646
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Entry
116411646 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF28-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116411646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
116411646
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116411646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
KRAB
zf-met
Yippee-Mis18
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
116411646
NCBI-ProteinID:
XP_031760219
UniProt:
A0A803JPG8
LinkDB
All DBs
Position
6:6478588..6486671
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AA seq
664 aa
AA seq
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MSGTAFGMVPVSFDEVAVYFSADEWHYLSERQRDLYKEVMLENLEVVLSLGYQYRRAAPQ
AVPAHGSAFILSTGKYFDECSPLFSEEGPEQGPGPEEDSLTQTNQNIPDSGSACIVNGEP
MPCEQRKQPSNKKLHKCLECKKVFGSWSHLLAHRRTHDREKIHKQNKSQISTHQAHVTPQ
QPKGLEVRLFQCSECEKTFSNQSVLSLHLRTHTGEKIFKCTECEKSFMKRAQLVVHKKCH
IEERPYKCTLCEKGYNQHSKLIEHLRTHTGEKPFTCTECKKSFTKRSHLTEHLRIHTGGK
PYKCNLCEKTFHYPSNLVEHQRTHTGDRPYQCTECDKSFIKMSKLIVHLRIHTGEKPYKC
NECNKSFSQQSNLVVHQRTHTGERPFQCSHCKKSFSYHYALVVHQRTHTGEKPYQCSLCD
KAFSQQSNLKLHQKTHESKPPQDSPNYENTFEQEPCLSASKNPQLDQFNEGDGLEKVPGL
PEAANSMESPEAIDDYEKNYISWSPLSEYLGAFLPPEKQHKCTECDKCFLEKSKLIVHQR
THTGERPFKCSVCDKTFIQWSHLSQHRKIHRGDRPYVCAECGKSFIRMSKLTVHRRTHTG
ERPYICAECGKQFSQQSNLVVHQRIHTGERPFKCTECEKTFRYQSALIKHRRNHSGDRTC
FDPL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcactgctttcggaatggtccccgtgtcctttgacgaggtggcggtgtacttc
tcagcagacgagtggcactatctgtcggagcggcagcgggatctgtacaaggaggtgatg
ctggagaacctggaggtggtgctgtcactgggataccagtaccgccgcgctgcgccccag
gctgtccccgcccatggctccgccttcattctgagcaccggcaagtatttcgatgagtgt
agccctttattctctgaagagggaccggagcagggacctgggcctgaagaagacagtttg
acccaaacaaaccagaatattccagacagcggttctgcatgtattgtaaatggcgagcca
atgccatgtgagcaaaggaagcagccgtccaataaaaagctccacaagtgtttggagtgc
aagaaagtcttcggcagttggtcgcacctcttggcgcataggaggacccatgacagggag
aagatccacaagcaaaacaaaagccaaatatcgacccatcaggcccatgtgactccccag
cagcctaaagggctcgaagtgaggttgttccagtgcagcgaatgcgaaaaaacgttcagc
aaccagtcggtgctctccttgcacctgagaacgcacacgggggagaagatcttcaagtgc
accgagtgcgagaaaagcttcatgaaaagggcgcagctggttgtgcacaaaaagtgtcac
atagaggagaggccatataagtgcacgttgtgcgagaagggatacaaccagcactcaaag
ctgatagagcacctcaggactcacacgggggagaaaccattcacatgcaccgagtgcaag
aaaagcttcaccaaaaggtcccacctgactgagcacctcaggattcacacaggggggaaa
ccatacaagtgcaacctgtgcgaaaaaaccttccactacccttccaacctggtggagcac
cagcgaacccacaccggggacaggccctatcagtgcactgagtgtgacaagagcttcatc
aagatgtctaagctcattgtccacctcaggatccacacgggggagaagccgtacaagtgc
aatgagtgcaacaaaagcttcagccaacagtccaaccttgtggttcaccagaggactcac
accggggagaggccattccaatgcagtcactgcaagaagagtttcagctatcactatgcc
ttggttgtccaccagagaacccacacaggggagaaaccctaccaatgttctctgtgtgac
aaggctttcagccagcaatcaaaccttaaactgcaccaaaaaacccatgagagcaagcca
ccacaagactctcccaactatgagaataccttcgaacaagaaccctgtttatcagcatct
aaaaacccccagttggaccagtttaatgaaggtgatgggttggagaaggtgcctgggtta
ccagaagcagccaactccatggaaagcccagaggccattgatgattatgagaagaactac
atctcatggtctcctctgagcgagtatcttggagccttcttgcccccagagaaacagcat
aaatgcactgagtgcgacaagtgcttcctagaaaagtccaagttgatcgtccatcagaga
actcacaccggcgaaaggcctttcaaatgctccgtgtgcgacaagacatttatccaatgg
tcccacctatcacagcacaggaaaatccacaggggcgataggccctatgtctgtgctgaa
tgcggcaagagcttcatcaggatgtccaagctcactgtccatcgcaggacgcacacgggt
gagaggccgtacatatgtgccgagtgcgggaagcagttcagccaacagtccaaccttgtg
gtccatcagaggattcacacgggtgagagaccattcaaatgcacagagtgtgaaaagact
ttccgctaccaatcagcgctaattaagcaccggcgaaaccattcaggtgatagaacctgc
tttgatcccttgtga
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integrated database retrieval system
