Xenopus tropicalis (tropical clawed frog): 116411739
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Entry
116411739 CDS
T01011
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
116411739
03037 Cilium and associated proteins [BR:
xtr03037
]
116411739
Transporters [BR:
xtr02000
]
Other transporters
Pores ion channels [TC:
1
]
116411739
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
116411739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
TRAP_beta
Arc_capsid_dom
Motif
Other DBs
NCBI-GeneID:
116411739
NCBI-ProteinID:
XP_031760436
UniProt:
A0A8J1JV22
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All DBs
Position
6:54806275..54855113
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AA seq
812 aa
AA seq
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MRKKDDSDDDDDDDDESGKNKRNVNRNRGRNTGNRGQREAKKTGKKNEQKKDAQKKKKSS
SDSSSTSSDEESLNEEEMAKLMENVEEKKKLISTIRNKPWRMKKKLLVLRDAQKFVEKFE
GALGKGKGKKFYAYKVMMLKKWIKFKRDFENFKTACIPWEMKIKEVESHFGSSVASYFIF
LRWMYGVNLVLFGLIFGLVVIPEILMGLPYGSLPRKTVPRNEEKTAMDFSVLWDFEGYAK
YSVLFYGYYNDQRTIGWLKFRLPLSYFMVGVGVFGYSLMVVIRTMASNANENTNDGDDGN
FNFSFKMFTSWDYLIGNPETADNKFASITTSFKESIVDEEESNKDENIHLTRFLRVLANV
MITCCLCGSGYLIYFVVKRSQTFSKMQNVGWYERNEVEIVMSLLGMFCPPLFETIANLED
YHPRVALKWQLGRIFALFLGNLYTFLLALMDDVNEKLAQEDVIKNITYWTLYNHYNSSTF
LNDTDTTPPPLHPADVPRGPCWETNVGVEFVRLTVSDILVTYVTILVGDFLRACFVRFMN
YCWCWDLEAGFPSYAEFDISGNVLGLVFNQGMIWMGSFYAPGLIGINVLRLLTSMYFQCW
AVMSSNVPHERVFKASKSNNFYMGLLLLILFLSLLPVAYTIMSLPPSFDCGPFSGKNRMF
DVIQETMQNDFPPFVGKIISSIANPGLIIPAILLMVLAIYYLNAVSKAYQQANIDLKKKM
HMQREEEKNKRNNNTQANSVMRDLEELLPPSARNALKLQSAANENQSSGTTSNAPNNAKR
EASAIQAPRIAITSPPAPRPGGTPVGRPHPKH
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaaagatgacagcgacgatgatgacgacgatgatgatgaaagtggtaaaaat
aagagaaatgtcaatagaaatagagggaggaatacaggcaacagaggacaaagggaagca
aagaaaacaggaaagaagaatgagcagaagaaagatgcccagaaaaagaaaaaaagcagc
agcgattcttcatccacttcttctgatgaagaatctctgaatgaagaggaaatggcaaaa
ttgatggaaaatgtggaggaaaagaagaaactgatatctaccattagaaacaaaccatgg
cgtatgaagaaaaagctcttagtcttaagggatgctcagaagtttgtggagaagtttgaa
ggggctttgggaaaggggaaaggaaaaaaattctatgcatataaagtaatgatgttaaag
aaatggatcaaatttaaaagggattttgagaattttaaaacggcctgtataccttgggag
atgaagattaaagaagtggaaagtcattttggttcatctgttgcttcatactttattttc
ttgaggtggatgtacggggtaaatctggtgctctttggcctaatttttggacttgttgta
ataccagagatattaatgggcttgccatatgggagtttgccacgaaagactgtgcctagg
aatgaagagaaaacagccatggatttctcggtgctttgggattttgagggttatgccaaa
tattctgtcctgttttatggctattacaacgaccagcgcacaatcggctggttaaaattc
agactgccattgtcatattttatggtcggggttggtgtgtttggatacagcctaatggtt
gtcattagaaccatggcaagcaatgctaacgaaaacacaaatgatggggatgatggaaat
ttcaatttcagctttaaaatgtttacgagttgggattatctgattggaaacccagaaact
gcagacaacaaatttgcatcaataacaacaagctttaaggaatccattgtagatgaggaa
gaaagtaacaaagatgaaaatatccatctaactagatttcttcgggtcctggccaatgtc
atgataacatgctgcttgtgtgggagtggttatctcatctactttgtggtgaaacgttca
cagacattttccaaaatgcagaatgtgggatggtatgaaagaaacgaggttgagatagtg
atgtccttgctgggaatgttttgccctccattatttgaaacaattgcaaacttagaagat
tatcacccacgtgtggcacttaagtggcaactgggaagaatctttgctctgttccttggt
aatctatacactttcctacttgctttgatggatgatgtcaatgagaagcttgctcaggaa
gatgttataaagaatattacatactggacgctgtacaaccactataactcatctaccttt
cttaatgatactgacaccaccccacctccactgcatccagctgatgtacctcgagggcca
tgctgggagaccaacgttggagttgaatttgtgaggctgactgtgtctgacatactagtc
acatatgtcactatcctggttggagattttctccgagcatgttttgtacgatttatgaat
tactgctggtgctgggatttggaagctggatttccttcctatgcagaatttgacatcagt
ggcaatgtgttagggctggtcttcaatcaagggatgatatggatgggttcattctatgct
cctggattaattggaattaatgtcctccgtttactaacctccatgtatttccagtgctgg
gcagtcatgagcagtaatgttccacatgaacgtgtctttaaagcatcgaaatcaaataac
ttttacatgggtttacttttgcttattctctttctgagtttactgcctgttgcctacaca
atcatgtctcttccaccatcatttgactgcggaccattcagtgggaagaacagaatgttt
gatgttattcaagaaacaatgcaaaacgatttccctccgtttgttggaaaaattataagt
tctattgcaaaccctgggctaattattccagctattcttcttatggtattagccatttat
tacctcaatgcagtttccaaagcttatcaacaggccaacatagacttgaagaaaaaaatg
cacatgcaaagagaagaggagaaaaataaaagaaacaataatactcaggcaaactcagta
atgagagaccttgaagagttattgcctccaagcgcaaggaatgctttgaaacttcagtca
gctgcaaatgagaaccagagcagtggaactaccagtaatgcaccaaacaatgcaaagagg
gaggcctctgcaatacaggctccacgcatagcaataacaagtcctcctgcacctagacca
ggaggaacacctgtgggtcgcccacatcctaagcactaa
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