Xenopus tropicalis (tropical clawed frog): 116412398
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Entry
116412398 CDS
T01011
Name
(RefSeq) LOW QUALITY PROTEIN: mitochondrial ubiquitin ligase activator of nfkb 1-like
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116412398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
116412398
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116412398
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116412398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
zf-RING_2
LapA_dom
DUF6377
DUF4381
DUF5683
Motif
Other DBs
NCBI-GeneID:
116412398
NCBI-ProteinID:
XP_031762444
UniProt:
A0A8J1JX26
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All DBs
Position
7:129585665..129590507
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AA seq
419 aa
AA seq
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METGGRPSVGQVILLGASSAITALFYSIYRHKYRSVQALKEAKRFSLTDDLQAVLSDLPG
KCVPYAVIEGAVTSVKEVLSSQYVENCRGVIQRLSLKEHKMVWNRTTHLWNDHEKIIHQR
SNTVPFDLAPEESGGAGVSVRVVRPLEAVDLGLETVYEKFYPAVQSFPNILGHYMTGERP
KGVQETEEMLKLGAAITGIGELVLDNKTIKLQPPKAGLCYYLSGTDFPGLLERQEGQMRW
WRILSIVFGAATCVTLFFILRRQYRHRKEKHQLQNLQREFEESRARQRVQQEQHNEEEVR
NPCAICLGKERSCVFLDCGXTFFCYPCYQAMPSPKXCPIVAMTLPELVPSVNSWGPPNLP
GDPSASPQFSLPREITGERAETREFAVNAPGTPCWWDRERSPGKVIEVNWAQSSSCWLG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagactggggggcgcccgtcggtcggacaggtcatcctgctcggcgccagttccgcc
atcaccgcgcttttctactccatctaccgccataagtaccgctctgtccaggcgctgaag
gaagccaagaggttctccctgactgacgacctgcaggcggttctgtcggaccttcccggg
aagtgtgtcccctacgccgttatagaaggggctgtgacttcagtgaaggaagttctgagc
agtcagtatgtggagaactgcaggggggtgatccagagactgtcactgaaagagcacaag
atggtgtggaacagaaccacccacctctggaacgaccacgagaaaatcatccaccagaga
agcaacaccgtccccttcgacctggccccggaggagtctgggggggccggggtgtcggtg
cgggtggtccggcccttggaagccgtggatctgggcctggagaccgtctatgagaagttc
taccccgcagtccagtccttccccaacatactgggccattacatgaccggggagcggccc
aaaggggtgcaggagacggaggagatgctgaagctcggggcggccattacgggcatcggg
gagttggttctggacaacaagaccatcaagctgcagccgcccaaggccggtttgtgttac
tacctgagcggcaccgacttcccggggctcctggagaggcaggaggggcagatgcgctgg
tggcggatcctcagcatcgtgttcggcgccgccacctgcgtcaccctcttcttcatcctc
cggcgccagtaccgccatcgcaaggagaagcaccagctccagaacctgcagagagagttc
gaggagtcgagggcccggcagagagtccagcaggaacagcacaacgaggaggaagtacga
aacccctgcgccatttgcctcggcaaagagaggtcctgcgtcttcctcgactgcgggncc
acatttttctgctacccctgctaccaggccatgcccagcccaaaanattgccccattgtc
gcaatgacattgcccgagttggtcccttctgttaacagctgggggccccccaacttgcca
ggcgacccctcggcatctccgcagttttcccttcccagggaaattaccggagaaagagcg
gaaaccagggaatttgcagtaaatgcccctggcactccttgctggtgggatagagaacgc
agcccagggaaagtgattgaagttaattgggcccaaagctcctcctgctggctgggatag
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