Xenopus tropicalis (tropical clawed frog): 394461
Help
Entry
394461 CDS
T01011
Symbol
esr1
Name
(RefSeq) estrogen receptor precursor
KO
K08550
estrogen receptor alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
394461 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
394461 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
394461 (esr1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
394461 (esr1)
Nuclear receptors [BR:
xtr03310
]
3. Estrogen like
3A. Estrogen receptor
394461 (esr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
ESR1_C
Motif
Other DBs
NCBI-GeneID:
394461
NCBI-ProteinID:
NP_988866
Xenbase:
XB-GENE-482193
UniProt:
Q6W5G9
A0A8J0QHU1
LinkDB
All DBs
Position
5:complement(48771409..>48850097)
Genome browser
AA seq
543 aa
AA seq
DB search
MLFFCLFIIMLSIPVASVFIAAAAAPVYSSASLSYAASSETFGSSSLTGLHTLNNVPPSP
VVFLQTPQLSPFIHHHGQQVPYYLESEQGTFAVREAAPPTFYRSSSDNRRQSGRERMTSA
NDKGPPSMESTKETRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCT
IDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQKEEQEQKNDVTPSEIRTT
SIWVNPSVKSMKLSPVLSLTAEQLISALMEAEPPIVYSEHDSTKPLSEASMMTLLTNLAD
KELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMVGLIWRSVEHPGKLSFAPNLLLD
RNQGRCVEGLVEIFDMLVTTATRFRMMRLRGEEFICLKSIILLNSGVYTFLSSTLESLED
TDLIHIILDKIIDTLVHFMAKSGLSLQQQQRRLAQLLLILSHIRHMSNKGMEHLYSMKCK
NVVPLYDLLLEMLDAHRMHTPKDKATAQEEDSRSPLTTTANGASPCLQPFYTSTEEVSLQ
STV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttttttgcttgttcattatcatgttgtctattcctgtggcgtctgttttcatt
gctgctgctgctgcaccggtgtatagctctgctagtctcagctatgctgccagctcagag
acattcggatctagcagtctgactgggctacatactttgaacaatgtgcctccaagtcct
gtagtgttccttcaaactccacagctatcaccgtttatccaccaccatggccaacaagtg
ccatactatttggagagtgaacagggaactttcgcagtaagggaagcagcacccccaaca
ttttacaggtcaagttcagacaacagaaggcagagtggaagggaacgcatgacatcagct
aatgataagggccctccatccatggaatctaccaaggaaacacgatattgtgctgtttgc
agtgactatgcatctgggtaccattatggcgtctggtcctgtgaaggttgcaaagctttt
tttaaaagaagcatacaaggacataatgactatatgtgccctgcaaccaatcagtgcacc
atagacaagaacagaagaaaaagctgccaagcctgccgactgagaaaatgctatgaagtg
ggcatgatgaaagggggtattcgaaaggatcgcaggggaggacgtatgttgaaacataag
cggcagaaagaagaacaagagcagaaaaatgatgtgactccatcagagattaggacaaca
tccatctgggtgaatccttcagtgaaaagcatgaagctgagcccagtactgtcgcttaca
gctgagcagcttatcagtgccttaatggaggcggagccacctatagtatattctgagcat
gactcaaccaaaccactcagtgaagcttccatgatgactctgcttacaaaccttgctgat
aaggagctagtacacatgattaactgggcaaagagggtgccagggtttgtggacttaaca
ctccatgaccaggtgcaccttctggaatgtgcttggctggagatccttatggtcggttta
atctggagatctgtggaacatccaggcaaactttcatttgcaccaaatctgttactggac
aggaatcagggacgctgcgtggaaggcttagtggagatttttgacatgctggtcactaca
gcgacaagatttcgcatgatgaggttacgtggggaagaatttatatgtctgaaatctatc
attcttctaaattctggtgtttatactttcctgtctagcacattagaatctcttgaagat
acagacttaattcatattattttggataaaataatagacacattagtccactttatggct
aaaagtgggctctctctgcagcagcagcaaaggcgactggctcagcttcttctcattctt
tcacacataaggcatatgagcaataagggcatggaacacttatacagcatgaagtgtaag
aatgttgtccccttatatgatttactgttggaaatgctggatgcccatcgcatgcacaca
ccaaaggacaaagcgaccgctcaggaggaagatagccggagtccgcttaccactactgca
aatggtgcatcaccttgcttacagcccttttacacaagcacggaagaagtgagcttacaa
agcacagtatga
DBGET
integrated database retrieval system
