KEGG   Xenopus tropicalis (tropical clawed frog): 394466
Entry
394466            CDS       T01011                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    394466 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    394466 (wdr61)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     394466 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_VPS8 WD40_RFWD3 eIF2A Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_EIPR1 Tricorn_2nd Ge1_WD40 Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_Nup120_160 PROPPIN Beta-prop_SPT8 Cytochrom_D1 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 WD_LRWD1 VPS8_N WD40_like Beta-prop_IFT122_2nd Beta-prop_pof12 WDR54 Vgb_lyase Nucleoporin_N DUF8135
Other DBs
NCBI-GeneID: 394466
NCBI-ProteinID: NP_988871
Xenbase: XB-GENE-5751496
UniProt: Q6PBD6
LinkDB
Position
2:complement(137257648..137266056)
AA seq 305 aa
MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTL
EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQH
LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAF
SPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHV
YDCPI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtacacagtacagcattcttttcaagcaggaacatgcccatgaagatgcaatatgg
tcagtaggatgggggaaaaactcaaatgatgggtcagagctggtgatcagtggttccctg
gatgatttggtcaaggtgtggaaatggtctgatgaacggttggagctacagtctacactg
gaaggccatcagctaggtgtggtgtcagtggatgtcagccctagtgggaacataatggct
tccagttccttagatgctcacattcgcctgtgggatcttgagagtgggaagcagatccgc
gccattgatgcaggaccagtggatgcttggtctgtagctttttctcctgactcccaacac
cttgcaactggaagccatgtgggaaaagtaaacatctttggtgtggagacagggaagaag
gaatattcactggatacaagagggaaatttatcctcagcattgcatatagcccagatggg
aaatacttagctagcggagccattgatggaatcataaacatatttgatattgctacaggg
aaactcctccacacgttggaaggacacgccatgcctattagatccctgactttctcccct
gattcccagctgctggttactgcatcagatgatggatatatcaagatttatgaagtacaa
catgccagtttggctgccaccttgagtgggcatggctcctgggtgctgaatgtggcattc
tctccagatgatactcattttgtttccagctcttctgataaaagtgtaaaggtctgggat
gtatctgccagaacatgtgtgcacaccttcctagatcaccaagaccaggtttggggcgta
aaatacaacaagaatggatccaaaattgtctctgtcgccgatgatcaggaaattcacgtg
tatgattgtcctatttga

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