Xenopus tropicalis (tropical clawed frog): 394538
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Entry
394538 CDS
T01011
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
394538 (hmg20b)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
394538 (hmg20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
WHAMM-JMY_N
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
394538
NCBI-ProteinID:
NP_988941
Xenbase:
XB-GENE-5809048
UniProt:
Q6P854
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All DBs
Position
1:complement(93541593..93575179)
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AA seq
319 aa
AA seq
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MSQPTKHLHGILHPVTKTQGGNFLVAVKQEKIDVQRAGDKNTGGEEEPVKKRGWPKGKKR
KKILPNGPKAPVTGYVRFLNERREQIRAQHPDLPFPEITKMLGAEWSTLPPHEKQRYLDE
AERDKQQYMKELREYQQSEAYKMCAEKIQEKKIKKEETSVAAASTLLNGHTHKTGDSQSD
GFSSFDVTIFTEEFLDQNKVREAELRRLRKMNMEFEEQNSILQRHTESMNCAKERLEQEL
AQEERQTIVLQQQLQTIRQILLSSFSSLPIPGTGETPTLGNLDVYMAKLHNLIEGNPTQH
EKLVMKIKEVLSRINSDHL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccaaccaaacatttacatggtattttgcaccctgtaacaaaaacacaagga
ggaaattttctcgtggctgtaaaacaagaaaaaatagatgtccaaagagctggcgataag
aacactgggggtgaggaagagcctgtaaagaaacggggatggccaaaaggaaagaaaaga
aaaaagattctgcctaatggccccaaagctccagtcactggttatgttcgttttttgaat
gaacgaagagagcagataagagcacagcatccagatcttcctttccctgagattacaaaa
atgcttggagccgagtggagcactctgccaccgcatgagaagcagagatacttagatgag
gctgagagggataagcagcagtatatgaaagagcttcgagaataccagcagtcagaggcg
tacaagatgtgtgcagaaaagatccaagagaaaaaaattaaaaaagaagagaccagcgta
gcagctgccagtaccttgttaaatggacacacacacaaaactggtgattcccagagtgat
ggattttcatcttttgatgtgactatatttacagaagagtttttggatcagaacaaagtc
cgtgaagcagagcttagaagactgcgcaagatgaatatggagtttgaggaacagaattct
atcttacagagacacacagagagtatgaattgtgccaaggagaggctggaacaggaactt
gcacaagaggaaaggcaaacaatagttctccagcagcagcttcaaactatccgccagatt
ctattgtctagcttttcttccttaccgatcccaggtacaggggagacaccaacattagga
aatcttgatgtgtacatggctaaacttcacaatctgatagagggtaacccaactcaacat
gaaaaactagttatgaagataaaagaagttttgtcccggataaacagtgatcacctatga
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