Xenopus tropicalis (tropical clawed frog): 394545
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Entry
394545 CDS
T01011
Symbol
cd44
Name
(RefSeq) CD44 antigen precursor
KO
K06256
CD44 antigen
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
394545 (cd44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
394545 (cd44)
04090 CD molecules [BR:
xtr04090
]
394545 (cd44)
00535 Proteoglycans [BR:
xtr00535
]
394545 (cd44)
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
394545 (cd44)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
394545 (cd44)
Exosomal proteins of other body fluids (saliva and urine)
394545 (cd44)
Exosomal proteins of colorectal cancer cells
394545 (cd44)
Exosomal proteins of bladder cancer cells
394545 (cd44)
CD molecules [BR:
xtr04090
]
Proteins
394545 (cd44)
Proteoglycans [BR:
xtr00535
]
Cell surface proteoglycans
Others
394545 (cd44)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Hyaluronan
Cell surface receptors
394545 (cd44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
TMEM51
SCIMP
Motif
Other DBs
NCBI-GeneID:
394545
NCBI-ProteinID:
NP_988948
Xenbase:
XB-GENE-487547
UniProt:
A0A803KIY4
LinkDB
All DBs
Position
4:complement(11059924..11096717)
Genome browser
AA seq
437 aa
AA seq
DB search
MAQLLWIVTGFCCLLSACQARTVISCRFKGVFHVEKYDRYALNREDAIKLCHELNTTIAN
LTLMEIAQDIGFETCRYGWIEDRVVIPRIKPNPICAANYTGIFTLGNNDSLRYDAYCYNA
SETEDKSCEPVLLLNETDLSHKTIDSYDPTLDTQNPFRTQNSDKSGDTVTDPGPAMITPD
PGQDWDDIQGTTDPHGDPFSTKGDGSDSTEQTNEPGIDHSGYQEVPGHHFPEGTDHEVNE
FDTEHTTTENSHDSDGHYEHPRHHDHQDNTGRDYTRPDDESSKEPDSYPGEVTDSALDPD
EEHGDHHDHDGEHGKNPNKGRKTQPGESENDITKQRRAARVPDWLIVLVALVALGLILSV
CLAINTRRLCGQKKKLVINGNKTKLEDGEIMEQNGDNIKSQEMVQLVSQEHTVEQENHMT
TEDIKRNEKDIDMKIGV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgctgtggattgttactgggttctgctgcctgctgagtgcctgccaagcc
cgcacagtgatcagctgccgcttcaaaggtgtcttccacgtggaaaagtacgatcgatac
gcactgaatcgggaagacgccatcaagctctgccatgagctcaacaccaccatcgccaac
ctcacgcttatggagatcgcccaagacattggctttgaaacctgcaggtacggctggatt
gaagaccgggtagttataccgcgaatcaaaccaaatcccatatgtgctgccaattacact
ggcatcttcaccctgggcaataacgattccctgcgctacgacgcctactgctacaatgcc
tcagagacggaagacaagtcctgtgaacccgttctcctcctcaacgaaacagacctttct
cacaaaaccattgattcctatgatccgaccttagatactcaaaacccttttcgaacccag
aattctgacaaaagtggagacacagtaactgatcctgggcctgccatgatcacaccagat
cctgggcaggattgggatgatattcaaggtaccactgacccacatggtgaccccttttct
acaaagggagatggttctgattccacagaacaaactaacgaacctggaattgatcattct
gggtatcaggaagtcccaggccatcattttcctgaaggaacagatcatgaagtaaatgaa
tttgataccgaacatacgaccacagaaaattctcatgattctgatggacattatgaacat
ccaagacatcatgatcatcaagataatacaggaagagattacaccaggccagatgatgaa
agcagtaaagagcctgatagctatccaggagaggtcaccgattctgcccttgatccagat
gaagaacacggtgaccaccatgaccatgatggagaacatggcaagaatccaaataaggga
cgaaagactcagcctggtgaatctgaaaatgacataaccaaacagcgaagagcagctaga
gttcctgactggttaattgtactggtggctctggtggctctgggcctgatcctgtctgtc
tgtctcgcaatcaatacccgcaggctgtgcggtcaaaagaagaaattggtcataaatgga
aacaaaacaaagctggaagacggggagattatggagcaaaatggggacaacatcaagtct
caagagatggttcagctcgtttcccaagagcacacagttgaacaagaaaatcatatgacc
acagaagacatcaagaggaacgagaaggacatagacatgaaaattggagtctag
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