KEGG   Xenopus tropicalis (tropical clawed frog): 394559
Entry
394559            CDS       T01011                                 
Symbol
elob
Name
(RefSeq) transcription elongation factor B polypeptide 2
  KO
K03873  elongin-B
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    394559 (elob)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    394559 (elob)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    394559 (elob)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     394559 (elob)
   Cul5 complex
     394559 (elob)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     394559 (elob)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 394559
NCBI-ProteinID: NP_988962
Xenbase: XB-GENE-959169
UniProt: Q6P7Z2
LinkDB
Position
9:12701360..12710078
AA seq 119 aa
MDVFLMIRHHKTTIFTDAKESTTVYELKRIVEGILKRPPEDQKLYKDDQVLDDNKTLGDC
GFTSQTARPQAPATVGLAFRSSGDSFEPLRVDPFSSPPELPDVMKPQETSGSANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgtgtttttgatgatccgccaccacaagaccaccatatttacagatgccaaggaa
agtaccacagtatatgaactaaaaaggattgttgagggaatcttaaagagacctcctgaa
gatcagaaactgtataaggacgaccaggtacttgatgacaacaagaccctcggagactgt
ggcttcaccagccaaaccgctaggccccaagctcctgccacagtgggtctggcattccgc
agctcaggagactcctttgagccgctccgggtggatcccttctccagcccgccggaactg
ccagatgtaatgaagccacaggaaacgagcgggagcgccaacgagcaagccgtgcagtag

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