Xenopus tropicalis (tropical clawed frog): 394565
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Entry
394565 CDS
T01011
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
xtr04517
IgSF CAM signaling
xtr04530
Tight junction
xtr04810
Regulation of actin cytoskeleton
xtr05100
Bacterial invasion of epithelial cells
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
394565 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
394565 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
394565 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
394565 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
394565 (arpc1a)
05100 Bacterial invasion of epithelial cells
394565 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
394565 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
394565 (arpc1a)
Membrane trafficking [BR:
xtr04131
]
Others
Actin-binding proteins
Arp2/3 complex
394565 (arpc1a)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
394565 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_IFT140_1st
Rax2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
394565
NCBI-ProteinID:
NP_988968
Xenbase:
XB-GENE-6034682
UniProt:
Q6P813
LinkDB
All DBs
Position
9:41699752..41753113
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AA seq
275 aa
AA seq
DB search
MSLHQFLLEPISCHAWNKDLTQIAISPNNHEVHIYKKSGNQWVKGHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKP
ASTPWGSKMPFGQMMSEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVADASKNMSVS
QLKTEFLPLLSVIFVSENSLVAATLESCVQGLRII
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcaccagtttttacttgaacccattagctgccatgcctggaataaggatcta
acacagattgcaattagcccaaataaccacgaagttcatatctacaagaagagtggaaat
cagtgggtaaaagggcacgagttaaaggaacacaacggacacatcactggcattgactgg
gctcctaaaagcgatcgtatagtaacatgtggtgctgaccgtaatgcatatgtttggagc
caaaaggatggtgtatggaagccaacattggtgattctacgcattaaccgtgcagctacc
tttgtaaagtggtctccgctagaaaataagtttgcagtgggaagcggagcaagactcata
tctgtgtgctactttgaatctgaaaatgactggtgggtaagcaaacacatcaagaagcct
atccgttcaactgtgctgagcctggactggcatcccaacaatgtgttactggcagctgga
tcctgtgacttcaagacaagagtgttctctgcatatattaaggaagtggatgaaaagcct
gcaagcactccatggggatccaaaatgcctttcggtcaaatgatgtcagagtttggagga
gttagcagcggaggctgggttcacagtgtcagtttctcagctagtggcaacaaacttgca
tgggtcagtcatgacagtactgtgtcagtagctgatgcttctaaaaacatgagtgtttcc
caactgaagacggagtttcttcctttattaagcgtcatctttgtatctgaaaacagcttg
gtagctgcaaccctggagtcatgtgttcaaggtctccggattatttga
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