Xenopus tropicalis (tropical clawed frog): 394619
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Entry
394619 CDS
T01011
Symbol
ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130
SNARE interactions in vesicular transport
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
394619 (ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
394619 (ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
394619 (ykt6)
Membrane trafficking [BR:
xtr04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
394619 (ykt6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
394619
NCBI-ProteinID:
NP_989023
Xenbase:
XB-GENE-949728
UniProt:
Q6P816
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All DBs
Position
3:complement(126511260..126521032)
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AA seq
198 aa
AA seq
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MKLYSLSVLYKGDNKVSLLKSAYDVSSFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVK
EQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQY
NALDSYLSKYQNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCGIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttacagtctcagtgttctatataagggagataacaaggtcagtcttctgaaa
agtgcctatgatgtctcctccttcagcttcttccagagatccagcatccaggagtttatg
gcatttaccagccagctgatagtggaacgatcagataaagggagccggtcctctgtgaag
gagcaagaatacctgtgccatgtgtatgtacgaaacgactccctagctggggtggtgatt
gctgataatgagtaccctccaagagtctgcttcacccttcttgaaaaagtacttgaagag
ttctccactcaagtggacaggatagactggccatcaggctcccctgccaccatccagtac
aacgctttggactcttaccttagcaagtatcagaaccctcgagatgcagatccaatgagt
aaagtacaggctgagctggatgagaccaaaattatcctgcacaacaccatggaatcatta
ttacaacgtggagagaaactggatgacctggtcagtaaatctgaggtcctggggacacag
tcaaaggctttctacaaaactgcacggaagcagaactcgtgctgcggcatcatgtga
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