Xenopus tropicalis (tropical clawed frog): 394620
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Entry
394620 CDS
T01011
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
394620 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
394620 (cnot9)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
394620 (cnot9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
394620
NCBI-ProteinID:
NP_989024
Xenbase:
XB-GENE-1001082
UniProt:
Q6P819
LinkDB
All DBs
Position
9:82340401..82347735
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AA seq
299 aa
AA seq
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MHSLATAAPVPAALAQVDREKIYQWINELSSPDTRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctggccacggcggcgcctgtgccggcagctcttgctcaggtggatcgagag
aaaatctatcagtggattaatgagttgtccagccctgatacccgcgagaatgccttgctc
gagctcagcaaaaagcgtgaatccgttccagaccttgctcctatgctgtggcactccttc
ggcacaatagcagcacttctacaggaaattgtgaatatctatccctcaataaatccacca
actttgaccgcacatcagtctaacagagtctgcaatgctttggcactgcttcagtgtgtg
gcatcgcacccagaaaccagatctgcatttcttgctgcccatattcctctgttcctgtat
cctttcttacacactgtcagtaagactcgaccctttgagtacctgcggctcaccagccta
ggagtcattggtgcccttgtgaaaacggacgaacaagaagtcataaacttcctccttacc
acagaaataatcccattgtgcctacgtattatggagtctggaagtgaactctccaaaaca
gttgccacttttattcttcagaagattctcctagatgatacgggtttggcctatatttgc
caaacttatgagcgcttctctcatgttgcaatgattttggggaaaatggtcctacagctt
tcaaaggagccatctgcaaggttgctgaaacatgtagtacgctgttacctccgcctctca
gacaatccaagagcgagagaggcattgaggcagtgtttgcccgaccagctaaaggatacc
acttttgcacaggtacttaaggatgataccacaaccaagcgctggctggctcagcttgtc
aagaacctgcaagaaggtcaggtcactgaccctagaggaatacccctgcctccccagtaa
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