Xenopus tropicalis (tropical clawed frog): 394693
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Entry
394693 CDS
T01011
Symbol
gmds
Name
(RefSeq) GDP-mannose 4,6 dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00051
Fructose and mannose metabolism
xtr00541
Biosynthesis of various nucleotide sugars
xtr01100
Metabolic pathways
xtr01250
Biosynthesis of nucleotide sugars
Module
xtr_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
394693 (gmds)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
394693 (gmds)
Enzymes [BR:
xtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
394693 (gmds)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-GeneID:
394693
NCBI-ProteinID:
NP_001032330
Xenbase:
XB-GENE-943015
UniProt:
Q28GX4
A0A8J0PK39
LinkDB
All DBs
Position
6:86280749..86643932
Genome browser
AA seq
369 aa
AA seq
DB search
MADNQGNCSGSPSNGAGKSRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTG
RIEHLYKNPHAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY
TADVDGLGTLRLLDATKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK
LYAYWIVVNFREAYNLFAVNGILFNYESPRRGANFVTRKISRSVAKIHLGQMEFVSLGNL
DAKRDWGHAKDYVEAMWLMLQTDEPEDFVISTGEVHSVREFVEKAFMHIGKTIVWEGKNE
NEVGRCSETGKIHVKVDHKYYRPTEVEFLQGDCSKAKNKLGWIPKVSFNELVKEMVEADI
ELMKTNPNA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaccagggaaattgctcaggctctccttccaatggcgcagggaagtcaaga
aaagtggccctcatcaccggaattactggccaggatggttcttacttggctgagttcctc
ttggaaaagggctacgaggttcatggcattgtgcggagatcaagttctttcaacaccggg
aggatcgagcatctctacaagaatccacatgctcatatagaaggaaacatgaagctgcat
tatggagatcttactgatagcacctgcctcgtgaaaataatcaacgaagtgaaacctaca
gaaatatacaatttgggagcacaaagtcatgttaaaatctcctttgacctggcagagtac
accgcagatgttgatgggcttggtactttacgtcttcttgatgcaacgaaaacctgtggc
cttattaattcagtgaagttttatcaagcctctactagtgagctgtatgggaaagttcaa
gaaattccccaaaaggaaactacccccttctacccaaggtcaccttatggggcagccaaa
ctctacgcttactggattgtggttaacttccgtgaagcctacaatctatttgctgttaat
ggcatccttttcaactatgagagcccaagaagaggggccaattttgtaacccgaaaaatt
agccgttcagtagctaagattcacctcggacagatggaatttgtcagccttggaaatctg
gatgccaaaagagattggggtcatgccaaggactacgttgaggctatgtggctgatgttg
caaacagatgagcctgaggactttgtcatatctactggggaggtccacagtgttcgtgag
tttgtggagaaagctttcatgcacatcgggaaaaccattgtgtgggaaggcaagaatgaa
aatgaggtgggacgctgcagtgagactgggaagatccatgtgaaggttgatcacaagtac
tacaggcctactgaagtagaattcctacaaggtgactgcagcaaagcaaagaataagctg
ggctggataccaaaagtctccttcaatgaactggttaaagagatggttgaagctgatatc
gaacttatgaagaccaatcccaatgcctaa
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