Xenopus tropicalis (tropical clawed frog): 394717
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Entry
394717 CDS
T01011
Symbol
xpo5
Name
(RefSeq) exportin 5
KO
K14289
exportin-5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
394717 (xpo5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
394717 (xpo5)
03036 Chromosome and associated proteins [BR:
xtr03036
]
394717 (xpo5)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
394717 (xpo5)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
394717 (xpo5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
394717
NCBI-ProteinID:
NP_989112
Xenbase:
XB-GENE-5947328
UniProt:
A1L1C9
LinkDB
All DBs
Position
5:2541722..2575394
Genome browser
AA seq
1207 aa
AA seq
DB search
MDEQVPALCEQLVRAVTVMLEPESRQEYRLEALKFCEEFKERSPLCVPCGLQLSNRSHSP
CVRHFGLHVLEHVIKFRWNDMSREEKVCLKDSVMDLISHGMHPILEEESHIKDMMARIVV
EMAKREWPQHWPDLLNELDSLTRVGEAQTELVMFILLRLAEDVVTFQNLPTQRRRDIQTT
MTQKMDVLFAFMLNILQQSVQQYQHLKTDPANSVKAQGMCRVAVASLKTLAGYIDWVAIT
HIMADNCKLLGMLCVLLSEPELQLEAAECLLIAVSRKGKLEDRIPLLILFGDEAIEYILS
VAQMADTETLEEKRYILLKRICQLICTLGTQICALTQSPDLKVNVPGNFNKYLETLLSFT
RHASQFLTSSTILTWGTIFRHEVLSRHPQLLAAIPDFLRSSMVSIVRVGFPSKDNSPSCK
YSRMDYESDEDFNGFFNSFRALMGGVVRAACYLDPHTGFCIAKEWLQFQLSAPLDPGPHN
AQPGDALCSPTSTSFLQWEAMTFFCECVTSQLFRVVPKEELPVAEGIGLLQQVLSYETMD
PLILSFVLTNLSSLMPFITCLSSYVPPVLSKLLDAISFPLSGDMKVSKSRGEMNVRRHAN
SSLIKVCRDYPELVQPHFEQLHARVTALLGEEQLLTQMGKCALMEALILASNQFKSYDRQ
QVLLEELIGPLVSGCVSEKTQRAFSGPDEFISFVGADILMHQQEEEDRGAPSRSQLSLCT
FALLGMVKRSQWPTDPEEAKAGGFVIGYSASGAPLLRNPGARLLLKVLDSLLALIRTMNN
LYLPEVMGKMGDTFCKSLNMLAMDRKLLMGTSQSAIEDCDLPAKTNLSRIQFFFASLFDN
CCQILGHCGPSMPHEFYSVPDLASRLLSSVFTNADNVPDYRLRLILRVLVKPLILSCPAE
KYESLVCPILGPLIIYLYQRLSQKWLSINQRTVVSEEDYTEEDSECQEVLEEQLVRQLTR
EVVDLIGSCCIARKSNDFCASGADVGHSAGQADGDEEEMMTTEAVAPGPIELTELGQFLL
ANEEISTSLLVISFSPLVWKDTMACQKAASHLCWPLLKQVMSASPLPADAALCVFSNILC
GLQTHGQHESCKFPLVQLSFQTYEALRPQYPELRGLMEQVPDVPRDSLEQFDAKLLAPPQ
KVGEKKRREHFKKLIAGCIGKPLGEQFRKEVHIRNLPALFKKKTKSAPDSDSVLSSCDSS
LVALFQP
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcaggtaccggctctgtgcgagcagcttgtccgggcggtcactgttatgttg
gagcccgagtcccgtcaggaatatcgcctggaagcgctcaagttctgcgaggagttcaag
gagagaagccccctctgtgtgccctgtggcctgcagctgtccaaccggagccattccccc
tgcgtccggcacttcggcctgcacgtcttggagcatgttataaagtttcgctggaatgac
atgtcccgggaggagaaggtttgtctgaaggacagtgtgatggatctcatttctcatggt
atgcaccccatcctggaggaggagagccacattaaggacatgatggcccgcattgttgtg
gagatggccaagagagagtggccccagcattggccggacctgctgaacgagctggattcc
ctcaccagagttggggaggcccagacggaactggtgatgttcatccttttgcgattggct
gaagacgtggtgacgttccagaaccttcccacgcagcgccgcagggacatccagacgacc
atgacgcagaaaatggacgtactgtttgcgttcatgttgaacatcctgcagcagagtgtg
cagcagtaccagcacctgaaaactgaccccgcaaacagtgtgaaggcccagggtatgtgc
cgcgttgctgtggcttctctcaagacactggccggatacattgactgggtcgctataacc
cacataatggcagacaactgtaagctcctgggcatgctgtgtgtgctgctgagtgagccc
gaactacagctggaggcagccgagtgtctgctcattgcagtcagcaggaagggaaagctg
gaggatcggatcccacttctgatcttatttggggatgaagccatagaatatattttgagt
gtggcacaaatggccgacactgagaccctggaagagaagcgctacattttattaaaaaga
atttgtcagctcatttgtactctgggcacccagatctgtgctctaactcagagccctgac
ctcaaagtaaatgtccctgggaactttaacaaatacctggagacccttctcagctttacc
cgacacgcaagccagtttctcacatcttccaccatcctgacatggggaactattttcaga
catgaggtgctgtctcgtcatcctcagctcctagcggccattcctgattttctacgttct
tctatggtcagcattgtgcgggtgggcttcccttccaaagacaacagtcccagctgcaaa
tactccagaatggactacgaaagcgatgaggattttaatggcttctttaactcattccga
gccctcatggggggtgtggtaagagctgcctgttacctggatcctcacacaggattctgt
atagctaaggagtggctgcaattccagctctctgctccattggatcccggaccccacaat
gctcagcctggggatgctctgtgcagccccacgtctacttccttcttacagtgggaagca
atgacctttttctgcgaatgcgtcaccagccagctcttccgggtcgtgcccaaagaggag
ctcccagttgcagagggtatcggcctcctccaacaagtcctcagctatgagaccatggat
cctctcattctgtcctttgtcctcaccaatctctcctccctgatgcctttcatcacctgc
ctgagctcctacgtgccccccgtgctgtccaagctcttggatgcaatatcatttccactt
tcaggagacatgaaggtgtctaagtcccgcggagagatgaatgtccgccgccatgccaac
tcctcccttatcaaggtgtgccgggattaccctgagctggtgcagcctcactttgagcaa
ctgcacgcccgtgtcacagccctgctgggggaggagcaacttctaacccagatgggcaaa
tgtgccctgatggaggcgctgattctggccagtaaccagttcaagagctacgaccggcag
caagtcctcctggaggaactgatcggcccattggtctccgggtgcgtctcagagaaaacc
caaagagcattttctggtcccgacgagttcatttcctttgtgggagcggatatactgatg
catcagcaggaagaggaagatcggggtgcacccagtcgctcccagctctccctgtgcaca
ttcgcgctgctgggaatggtcaaacgctcgcagtggccgactgatcccgaggaagccaaa
gccggggggtttgtgattggctactccgccagtggggcgcctctgttgcgcaacccgggt
gcccggctgctgctgaaagtcctggacagtctgttggcgctgatcaggacaatgaataac
ctgtacctcccggaagtcatgggcaaaatgggcgacactttctgcaagtcgttaaacatg
ctcgccatggacaggaaacttctcatgggcaccagccaatcagccatagaagactgtgac
ttgcccgctaagacgaatttgagcaggatacagtttttctttgcttctctctttgataac
tgctgccagatactgggacactgcggcccctccatgccccacgaattctactccgttcct
gacttggcatctcgtctgctcagctctgtcttcaccaacgcggacaatgtacctgattac
aggctccgattaattctacgtgtccttgtgaagccgctaatcctttcctgccccgcagag
aagtacgagagcctggtctgccccatcctcggacccctgattatttatctgtaccagaga
ctttcccagaaatggctgagtatcaaccagagaactgtagtgagtgaggaggactacacg
gaggaagacagtgagtgccaagaggttctggaggagcagctagtaaggcagctgacccgg
gaagtggtggatttgattggttcttgctgtatcgccaggaaaagcaatgatttctgtgca
tctggggcagatgttgggcacagtgctgggcaggccgatggcgatgaggaggaaatgatg
acaacggaggccgtggcacctggacccattgaactgacagagctggggcaattcctgctt
gccaatgaggagatttccacctcgctgctggtcatttccttcagcccgttggtgtggaag
gacacgatggcctgtcagaaggcggcctctcacctctgctggcccctgctcaaacaggtg
atgtctgcgtcccccctgcctgccgatgccgctctgtgtgtgttttccaatatactgtgt
gggctgcagactcacgggcagcatgaaagctgtaagttccctttggtgcagctctcgttc
cagacctacgaggccctgcgcccccagtacccagagctgcgggggctgatggagcaagtg
ccggacgtcccgcgagattccctggagcagtttgacgcaaagctcttggcccccccgcag
aaagtgggcgagaagaagcggagggaacacttcaagaagctgatcgccgggtgtatcggg
aagccgctgggggagcagttccggaaggaggtccatatacgcaacttgcccgctttgttc
aagaagaagaccaagtcggcgccggacagcgattccgtactgagcagttgtgacagctcc
ctggtggctctgttccagccctga
DBGET
integrated database retrieval system
