Xenopus tropicalis (tropical clawed frog): 394729
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Entry
394729 CDS
T01011
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03020
RNA polymerase
xtr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
394729 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
394729 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
394729 (polr2c)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
394729 (polr2c)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
394729 (polr2c)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
394729 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
394729
NCBI-ProteinID:
NP_989124
Xenbase:
XB-GENE-998258
UniProt:
Q6P7Y7
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All DBs
Position
4:complement(76275380..76287663)
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVRITELTDENVKFIVENTDLAIANSIRRVFIAEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKLQYSRDCTCDEFCPECSVEFTLDVRCNEDQTRHVTSRDL
VSNNLRVIPVTSRSRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSEIDEEEAEAPYDPTGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgcgaaccagcctacagtgcggataacggagctcactgacgagaatgtcaag
tttatcgtggaaaatactgacttggcaattgctaactcgatccgtagggtgttcatagca
gaagttcctactatagctatagattgggtgcagatagatgcaaattcctctgttcttcac
gatgagttcatagctcacagagttggattgatccctttgaccagtgatgatatagtagat
aaactgcagtactctagggattgtacatgtgatgagttttgtccagagtgctctgtggaa
tttactttggatgtccgatgcaatgaagaccagacacgccatgtgacctctcgtgatctt
gtctcaaacaacctccgcgttataccagtgacatcacgaagcagagacaatgaccctaat
gactacgtggagcaagatgatattttgattgtgaagctcaggaaaggacaggagttgcgt
ctccgagcatatgcaaagaagggctttggaaaggaacatgccaagtggaaccccacagca
ggagtggcatttgaatatgacccagataatgcactacggcacacagtataccccaagcct
gaggaatggccaaagagtgaatactcagaaattgatgaagaagaggctgaggctccatat
gatccaactgggaaaccagaaaggttttattataacgtggagtcatgcggatctcttagg
cctgagactatcgttctttctgctctctcaggcctgaaaaagaagctcagcgatctccaa
acccagcttagccatgaaatccagagtgatgtcctcaccattaactga
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integrated database retrieval system
