Xenopus tropicalis (tropical clawed frog): 394734
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Entry
394734 CDS
T01011
Symbol
tuba1cl.3
Name
(RefSeq) tubulin alpha chain 1c like
KO
K07374
tubulin alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04210
Apoptosis
xtr04530
Tight junction
xtr04540
Gap junction
xtr04814
Motor proteins
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
394734 (tuba1cl.3)
09143 Cell growth and death
04210 Apoptosis
394734 (tuba1cl.3)
09144 Cellular community - eukaryotes
04530 Tight junction
394734 (tuba1cl.3)
04540 Gap junction
394734 (tuba1cl.3)
09142 Cell motility
04814 Motor proteins
394734 (tuba1cl.3)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
394734 (tuba1cl.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
394734 (tuba1cl.3)
03036 Chromosome and associated proteins [BR:
xtr03036
]
394734 (tuba1cl.3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
394734 (tuba1cl.3)
04147 Exosome [BR:
xtr04147
]
394734 (tuba1cl.3)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
394734 (tuba1cl.3)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
394734 (tuba1cl.3)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
394734 (tuba1cl.3)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
394734 (tuba1cl.3)
Exosomal proteins of other body fluids (saliva and urine)
394734 (tuba1cl.3)
Exosomal proteins of colorectal cancer cells
394734 (tuba1cl.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
394734
NCBI-ProteinID:
NP_989129
Xenbase:
XB-GENE-5834444
UniProt:
Q6P8D2
LinkDB
All DBs
Position
9:83609765..83614244
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATVKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatctcagtccatgtggggcaggcaggagtgcagattggcaatgcatgc
tgggagctgtactgcctggaacatgggatccaaccggacggccagatgcccagcgacaaa
accattgggggaggggacgattccttcaacaccttcttcagtgagaccggagccgggaag
cacgtcccccgcgctgtgtttgtggacctggagcccactgtgattgatgaggttcggacc
ggtacctaccggcagcttttccaccctgagcaactcatcacaggcaaggaagatgccgcc
aataactacgcccgcggccattacaccatcggcaaggagatcattgacctggtgctggac
aggatccgcaagctggcggatcagtgcacaggactccagggcttcctcatcttccacagc
ttcggggggggcactggctctggattcacctccttgctgatggaacgtctctctgttgac
tatggcaagaagtccaagctggaattctccatctatccagctcctcaaatctccacggct
gtggtggaaccctacaactccatcctcaccacccacacaacactggagcactcagactgt
gccttcatggtggataatgaagccatttatgacatctgcagaaggaacctggacattgaa
cgcccaacctacaccaacctgaaccgtctgattggccagattgtgtcctctatcactgcc
tccctcagatttgatggagccctgaatgtggacctgacagaattccaaaccaacttggta
ccctacccccgtatccatttccccctggccacctatgcccctgttatctctgcagagaaa
gcttaccatgagcagctctctgtatccgagatcaccaatgcttgctttgagccagccaat
cagatggtgaaatgtgacccccgtcatggtaaatacatggcttgttgcctgctgtaccgc
ggtgatgtggtgcccaaagatgtcaatgctgctattgccacagtgaaaaccaagcgcacc
atccagtttgtggactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggttccgggtggggatctggccaaggtacagcgagctgtgtgcatgttgagcaac
accaccgccattgctgaggcctgggctcgcctggatcacaagtttgaccttatgtatgcc
aagcgtgcctttgtgcactggtatgtaggggagggaatggaggaaggggagttctctgag
gcccgcgaggatatggccgccctggagaaggattatgaggaggtcggaactgacagcgtg
gagggagagggagaagaagagggagaagaatactaa
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