Xenopus tropicalis (tropical clawed frog): 394761
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Entry
394761 CDS
T01011
Symbol
sec22b
Name
(RefSeq) vesicle-trafficking protein SEC22b precursor
KO
K08517
vesicle transport protein SEC22
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130
SNARE interactions in vesicular transport
xtr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
394761 (sec22b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
394761 (sec22b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
394761 (sec22b)
Membrane trafficking [BR:
xtr04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
394761 (sec22b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
Motif
Other DBs
NCBI-GeneID:
394761
NCBI-ProteinID:
NP_989156
Xenbase:
XB-GENE-999421
UniProt:
Q6P7L4
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Position
4:complement(118082094..118091201)
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AA seq
215 aa
AA seq
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MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLNEQSPTRCTLEAGAMT
FHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNYIQ
KTKKSYIDSRARRNLSSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKY
RQDAKYLNMRSTYAKLAAVAVFSVMLIVYIRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgctaacgatgatcgcccgagtggctgacgggctcccgctggctgcttccatg
caggaggacgaacagtcaggcagggacctgcagcagtaccagaaccaggccaagcagttg
ttccgcaagctgaatgaacagtctccaacgcggtgcaccctggaggcaggagccatgacc
ttccactatctgattgagaaaggtgtttgttatctggttctctgtgaagctgctttcccc
aagaagctggcctttgcttatctggaagatctgttttctgaatttgacgaacaacatggg
aagaaagtgcccaccgtgtcacggccatactcctttatagagttcgataactacatccag
aagacaaagaagtcatacatcgacagccgagccagaagaaatcttagttctgttaacact
gagctgcaggatgtgcagagaatcatggttgctaatattgaagaagttttgcttcgggga
gaagcactttcagctttggattcgaaggccagcaacctgtcaaccttgtcaaagaagtac
cgccaagatgcaaagtacctgaacatgcgctccacttacgccaagctggccgccgtagca
gtcttctccgtcatgctcattgtgtatatccgattctggtggttgtga
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