Xenopus tropicalis (tropical clawed frog): 394767
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Entry
394767 CDS
T01011
Symbol
itgb1
Name
(RefSeq) integrin beta-1 precursor
KO
K05719
integrin beta 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03271
Virion - Rotavirus
xtr04145
Phagosome
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04514
Cell adhesion molecules
xtr04530
Tight junction
xtr04810
Regulation of actin cytoskeleton
xtr04820
Cytoskeleton in muscle cells
xtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
394767 (itgb1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
394767 (itgb1)
04514 Cell adhesion molecules
394767 (itgb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
394767 (itgb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
394767 (itgb1)
04530 Tight junction
394767 (itgb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
394767 (itgb1)
04810 Regulation of actin cytoskeleton
394767 (itgb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
394767 (itgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
394767 (itgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
394767 (itgb1)
04515 Cell adhesion molecules [BR:
xtr04515
]
394767 (itgb1)
04090 CD molecules [BR:
xtr04090
]
394767 (itgb1)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
394767 (itgb1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Proteins found in most exosomes
394767 (itgb1)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin beta subunits
394767 (itgb1)
CD molecules [BR:
xtr04090
]
Proteins
394767 (itgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
394767
NCBI-ProteinID:
NP_989160
Xenbase:
XB-GENE-946725
UniProt:
Q6P4X1
LinkDB
All DBs
Position
6:22871901..22896284
Genome browser
AA seq
798 aa
AA seq
DB search
MARYSVLTFGLLTCLALCINAQQGGTECLKANAKSCGECIQAGPNCGWCTKVNFLQEGEP
TSARCDDLAALKNKGCPEEDIQNPRGRKQKLKDIPITNKGKGERMDPANITQIRPQQLVF
ELRSGEPQTFNLTFRRAEDYPIDLYYLMDLSFSMKDDLENVKSLGTALMTEMEKITSDFR
IGFGSFVEKTVMPYISTTPAKLINPCTSDQNCTSPFSYKNVLNLTSDGKLFNDLVGKQQI
SGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLHGNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEDFQPVYQELKNLIPKSAVGTLS
SNSSNVIQLIIDSYNSLSSELILENSKLPEGVTISYKSFCKNGVKGTGEDGRKCSNISIG
DQVEFEISVTAHKCPKKGQAESIKIKPLGFTEEVEIVLQFICECDCQEKGTPNSPECHHG
NGTFECGACRCNEGRIGKECECSTDEVNSEDMDAYCRRENSSEICSNNGDCICGQCVCKK
RDNPNEVYSGKYCECDNFNCDRSNGLICGGKGVCKCRVCECFPNYSGSACDCSEDTSTCM
AKNGQICNGRGICDCGRCKCTDPKFQGPTCELCQTCVGVCTEHKECVQCRAFQKGEKQEV
CLEQCMHFNISLVESREDLPQPGQAEALTHCKEKDAEDCWFYFTYSVDSKNEVLVHVVKE
PECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
PIYKSAVTTVVNPKYEGK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttattcagtattgacgtttggattacttacttgtttggctttgtgcataaat
gcccagcaaggtgggacagaatgtctaaaagcaaatgccaaatcatgtggagaatgtatt
caagccgggcccaactgcggctggtgcactaaagtgaacttcttacaagaaggagagccc
acgtcagcacgttgtgacgatttggctgctttgaaaaacaaaggctgccctgaagaagac
atccaaaaccccaggggacgtaaacaaaagctaaaagatatcccaataacaaacaaaggg
aaaggagaacgtatggaccctgcaaacatcacccaaatccgacctcaacaactggtattc
gaactgcgatcaggtgaaccccagacatttaatttgacattcagaagagcagaagactat
ccaattgacctgtactatcttatggacctctcattttctatgaaagatgacttggagaac
gttaaaagccttggaacagcactaatgacagaaatggagaaaattacttcagatttccgg
ataggttttggctcttttgtggaaaaaacagtcatgccctacataagcaccactcctgcc
aagcttattaacccatgcacaagtgatcagaattgcaccagcccattcagctataaaaat
gtcctcaacctcactagcgacggaaagttgtttaacgacctggtaggcaagcagcagatc
tccggtaacttggattctcccgagggaggctttgatgcaattatgcaggttgcggtctgt
ggtgagcaaattggttggagaaatgtcacacgcttgctggtcttctcaactgacgcagga
ttccattttgccggagatggaaaattaggcggcattgtattgccaaatgatggcaaatgt
catttgcatgggaacatgtacacaatgagccactattatgactatccctcaattgctcac
ctagttcagaaacttagtgaaaacaacattcagaccatttttgctgttacagaggatttc
cagccagtctaccaggagctgaaaaatctgataccaaaatcagctgtgggaaccttgtcg
tcaaattccagcaatgtgattcaactgattattgactcctataattctctttcctctgaa
cttattttggaaaacagcaaattgccagagggtgtaacaatcagctataaatcattctgt
aagaatggagtcaagggaactggggaggatggaaggaaatgttcaaacatttctattgga
gatcaggtggaatttgaaattagtgtgacagctcacaagtgccccaaaaaaggacaagcg
gaatccataaaaatcaaaccacttggatttaccgaagaagtagagattgttctccagttc
atctgtgaatgtgattgccaggaaaaagggacgcccaacagccctgaatgtcatcatgga
aatggaacattcgaatgtggtgcctgcagatgtaatgaggggcgcattgggaaggagtgt
gaatgcagcaccgatgaagtaaacagcgaagatatggacgcttattgtcgaagagaaaat
agctctgaaatctgcagtaacaacggggactgtatatgcggccagtgtgtgtgcaaaaaa
cgggacaatcccaatgaagtttactccggcaagtactgtgaatgcgacaacttcaactgt
gacagatccaatgggctgatttgtggaggtaaaggcgtgtgcaagtgtcgagtatgtgaa
tgtttccccaattactccggcagtgcttgtgactgctcagaggatacctcgacttgtatg
gcaaaaaatggccagatatgtaacgggagaggaatatgtgactgtggaaggtgtaaatgt
acagatcctaaattccaaggaccaacctgtgaactgtgtcagacctgcgttggtgtttgt
acggagcacaaagaatgtgtccagtgccgagctttccagaaaggagagaagcaagaagta
tgcctggagcagtgcatgcactttaacatctctttagtggaaagtcgggaagacttgccc
cagccaggccaggcagaagccctcacacactgtaaggaaaaggatgcagaagactgctgg
ttttacttcacgtattcagtcgattcaaagaatgaagttctggtgcatgtggtgaaggag
ccagagtgtcccagcggtcctgacatcattcctattgtcgccggtgtggttgctggcatt
gtgctcatcggactggcactgttgctcatatggaaactgcttatgatcattcacgacaga
agggagtttgccaagttcgagaaggagaaaatgaacgctaaatgggacactggcgaaaat
cccatctacaagagcgccgtgacaaccgtggtgaatcctaaatatgagggaaaatga
DBGET
integrated database retrieval system
