Xenopus tropicalis (tropical clawed frog): 394824
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Entry
394824 CDS
T01011
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
394824 (otx1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
394824 (otx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
394824
NCBI-ProteinID:
NP_989216
Xenbase:
XB-GENE-939804
UniProt:
Q6P4Y7
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Position
5:complement(32911440..32919402)
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AA seq
336 aa
AA seq
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MMSYLKQPPYGMNGLGLTGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQSSSGAGVKSRPAKKKCSPA
RESSGSESSGQFTPPAVPSSGSSSSSSSSSSNSSGNPGLATAPLNGSTSTAFSIWSPASI
SPGTGPGSGPDPLGTGSASCMQRSGSSSAASYPMSYSQAAGYTQGYPAPSSSYFSGVDCS
SYLAPMHSHHHPHQLSPMAPSSMSGHHHHHHHLSQTSSHHHHHHHHQGYTGTGLPFNSSD
CLDYKEQAAASSWKLNFNSTDCLDYKDQSSWRFQVL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcccccctatggcatgaatggcttggggctaacggggcct
gctatggacttattgcatccgtctgtgggatacccagcaactccgcggaagcagcgcaga
gagcgcaccacctttacccgctcgcagctggatgtgctggaggccctgttcgccaagact
cgctacccggacatattcatgcgcgaagaagtcgcactaaagatcaacctgccggaatct
agagtccaggtctggtttaagaaccgcagagccaagtgtcggcagcagcagcagcaacag
cagagcagcagcggggcgggagtgaagagcagaccggccaagaagaagtgcagcccggcc
agagagagttcggggtcggagagcagcggccagttcactccccccgcggtgcccagctcc
ggctcttcctcctcgtcctcctcttccagttccaattcatccgggaaccccggcctggct
acagccccgctgaatggcagcacctccacagccttctccatctggagcccggcctccatt
tctccgggcactggccctgggtctggccccgaccccttgggaacaggcagcgcctcctgc
atgcaacgctctggctcctcatctgcagcttcctaccccatgtcctacagtcaggcagcc
ggctacacccagggctatcctgccccttcttcctcctacttcagcggggtggattgcagc
tcttacctggcaccaatgcattctcaccatcaccctcaccagctgagccccatggcccct
tcctccatgtctggccaccatcatcatcatcaccacctgagccagacctccagccatcac
caccaccaccaccatcaccagggctataccggcacaggcttgccctttaactcctctgac
tgtctggactataaggaacaagccgcagcgtcttcttggaaactcaactttaattccacc
gactgtctggactacaaagatcagtcctcctggaggttccaggtcttgtga
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integrated database retrieval system
