Xenopus tropicalis (tropical clawed frog): 394890
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Entry
394890 CDS
T01011
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
394890 (tia1)
03041 Spliceosome [BR:
xtr03041
]
394890 (tia1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
394890 (tia1)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
394890 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
RRM_3
DUF1866
Flg_new_2
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
394890
NCBI-ProteinID:
NP_989276
Xenbase:
XB-GENE-1002876
UniProt:
Q6P369
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All DBs
Position
3:complement(122055113..122068089)
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AA seq
386 aa
AA seq
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MEEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAA
ASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTD
DIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMLNPVQQASQI
SFPPPYGQWGQWYGGAQQIGQYVPNGWQMPAYGVYGQAWNQQGYSQTPSSAATWVGPNYG
VQPQPGQNGTLITNQTGYRMAGYQTQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatcttcccagaacgctgtatgtgggaaatctctctagggatgtgacagaa
cctttgattcttcaggtgtttagccaactcggtccatgcaaaagctgcaagatgattatg
gatactgctggaaatgatccctactgctttgtagagttctttgagcaccgacatgcagct
gcatctttagcagctatgaatggccgaaagataatgggcaaggaagtaaaagtcaactgg
gccactacgccaagcagccagaaaaaggatgcaaatagtagttccgttgtcagcacactg
cgttctcaagatcatttccatgtctttgttggtgacttgagcccagagatcacgactgat
gatataaaagctgcttttgcaccatttgggagaatatcagatgcccgtgtggttaaagat
atgacaactggaaaatccaagggttatggattcgtgtccttctttaataaatgggatgca
gaaaatgccattgcacagatgggaggccagtggcttgggggtcgacagattagaactaac
tgggccacaagaaaacctccagcgccaaagagcacctatgaatccaacacaaagcagtta
acttatgaggaagttgtcaaccagtcaagtcccagtaattgtactgtgtactgtggcggc
gtcacaagtggactaactgaacaactcatgcgacaaaccttttcaccttttggtcaaata
atggaagtcagagtctttccagataaaggctactcctttgtacggtttagttcccatgaa
agcgcagctcatgctattgtcagtgtcaatggaactactattgaagggcatgtggtaaag
tgttactggggaaaggagaccccagatatgctaaatcctgttcagcaggcaagccaaatt
agctttcccccaccatatggccagtggggtcagtggtacggtggggctcaacaaataggc
cagtatgtgcccaatggctggcaaatgccagcatatggggtgtatggacaggcatggaat
cagcagggatatagtcaaacgccatcgtctgctgccacatgggtgggaccaaattacggg
gtgcaacctcagcctggccagaatgggactctgatcacgaaccaaactggctatcgaatg
gctggataccaaacccaatga
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