Xenopus tropicalis (tropical clawed frog): 394924
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Entry
394924 CDS
T01011
Symbol
psen1
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04310
Wnt signaling pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
394924 (psen1)
04330 Notch signaling pathway
394924 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
394924 (psen1)
Peptidases and inhibitors [BR:
xtr01002
]
Aspartic peptidases
Family A22: presenilin family
394924 (psen1)
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GFIT
Motif
Pfam:
Presenilin
Orf78
YpzG
Motif
Other DBs
NCBI-GeneID:
394924
NCBI-ProteinID:
NP_001027027
Xenbase:
XB-GENE-481916
UniProt:
Q6P2Y8
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Position
8:complement(106192973..106220424)
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AA seq
433 aa
AA seq
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MNDTNERRSNEHSESQSNGQTQSSSQQVLEQDEEEDEELTLKYGAKHVIMLFVPVTLCMV
VVVATIKSVSFYTRYDGQLIYTPFTEDTDSVGQRALNSILNTAIMISVIIVMTILLVVLY
KYRCYKVIHGWLIISSLLLLFFFSYIYLGEVFKTYNVAMDYITLALMIWNFGVVGMICIH
WKGPLLLQQAYLIMISALMALVFIKYLPEWTTWLILAVISVYDLIAVLSPKGPLRMLVET
AQERNETLFPALIYSSTMIWLVKMADGDPGFKQSASKKTYNAQAPVAQPRSDSAASDDNG
GFDTAWEEQRNEQIGQINSTPESRAAVQALPSNNPPSEDPEERGVKLGLGDFIFYSVLVG
KASATASGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDYLVQ
PFMDQLAFHQFYI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccaatgaaagaagaagcaatgagcactcagagtctcagagcaatgggcag
acacagagcagttcccagcaagtactggaacaggacgaggaagaagatgaagaactcacc
ttgaaatatggagccaagcatgtaatcatgctgtttgtccctgtcacgctatgcatggtg
gtggttgttgcaaccatcaagtctgtcagcttttacacacgctatgatgggcagctaatc
tacaccccattcacagaagacacggatagtgttggacaaagagctctgaactccatactc
aacacagccataatgatcagtgtaattatagtcatgaccatactgctggttgttctgtac
aagtacagatgttacaaggtcatccatggctggctcataatatcttcccttttattgctt
tttttcttctcttatatataccttggtgaagtgtttaaaacctataatgtggccatggat
tacatcacgctggctttaatgatctggaattttggcgtagtaggaatgatctgcattcac
tggaaggggccccttcttttgcagcaggcatatcttattatgattagtgctcttatggcg
ctggtgtttataaaataccttcctgagtggacaacttggctcatcttagcagtgatatct
gtttatgatcttattgctgtcctgtctccaaaaggacctttacgcatgctggtcgagaca
gctcaggagagaaatgaaacccttttcccagcactaatttattcttctacaatgatatgg
ttagtaaagatggcagatggagatccaggctttaagcaaagtgcctcaaagaaaacatac
aatgcacaagctccagttgcccagccaaggagtgattctgcagcatcagatgacaatggt
ggctttgatacagcttgggaggaacagaggaatgaacagattgggcaaattaattccact
ccagaatcaagagctgctgtccaggctcttccaagcaacaacccccccagtgaagaccct
gaagagaggggagtgaaacttggactgggagacttcattttctacagtgtgcttgttggg
aaggcatctgccacagctagcggagactggaacactaccctggcttgttttgtggccata
ctgattggcctatgccttacactacttctacttgccatcttcaagaaagcattacctgct
ctccccatctctataacttttggacttgttttttattttgccacggactaccttgtacag
ccattcatggaccaactggcattccaccagttttacatttaa
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