Xenopus tropicalis (tropical clawed frog): 394934
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Entry
394934 CDS
T01011
Symbol
nup62
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
394934 (nup62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
394934 (nup62)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
394934 (nup62)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF3918
Nup188_C
TP0873_N
Motif
Other DBs
NCBI-GeneID:
394934
NCBI-ProteinID:
NP_001001989
Xenbase:
XB-GENE-6257978
UniProt:
A0A8J0PCT8
Q6DIE3
Q6P2Y9
LinkDB
All DBs
Position
8:38695271..38713897
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AA seq
552 aa
AA seq
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MSGLNFGAASAGGFSFGTPKTNTTTATTGFSFGATTAAPSGGFNFGTATQTPASTTGQAT
GLFSFSTPASSAAPTSGFSFGAQVTSTPAPASGGLTFGANTPKLNLGLGNQPAAATAQTS
QPLGGFSFGNAPVQTQPSTTSVGGFPFAGGVGSTATNAFAQPAAPTGITFAAAVSTAAAP
ITTSQPASTFSFGTQPQAAPGLNFGLLSSTQSAVPSTASTPAASQSVAPTPGLSLTSLGK
PADPSAAMVSTGTATTATPSLSSLLGTSGPSLFSSLATSTAAAVVTTTTTAAASGLSLSS
TTAGTGFGMKILPSSAAPTGTLPTSTSLGMRTPLSGTTVQANVVSSAAAAGVGTAATMTY
AQLENLINKWSLELEDQEKHFLQQATQVNAWDRTLMQNGERITTLHREMEKVKLDQKRLD
QELDFILSQQKELEDLLTPLEESVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQD
LKEVIEHLNTSAGPGDAGNPLQQICKILNAHMDSLQWIDQNSALLQRKVEQVTKECESRR
KEQERGFSIAFD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcttaaactttggtgctgcctctgctggaggatttagctttgggacaccaaaa
accaatactacaactgctacaactggcttttcctttggtgcaacaactgcagccccttct
ggtggtttcaatttcggcacagccacacagactcctgcttccaccacaggccaagcaact
ggacttttttctttctccactccagcctcttctgcagcaccaacatctgggttcagcttt
ggtgcacaagtaacatctactccagcacctgcctcaggcggtcttacctttggtgcaaac
acgcccaaactgaatttaggattaggaaatcagcctgctgctgccaccgctcaaacatcc
caacccttgggaggtttctcatttggaaatgcaccagtacagacacaaccatctaccacc
agtgttgggggcttcccatttgctggtggagttggttctacagctacaaatgcctttgca
caacctgcagctcccacgggcatcacctttgcagcagcagtttcaacagctgcagcacca
ataaccacatctcagcctgccagtacctttagctttggaacccagccacaagcagcccct
ggtttgaactttggtttattgtcatcgactcagtctgctgttccttccactgcttctact
ccagctgcctcgcagtcggtagcaccaacacctgggcttagccttacatcattgggcaaa
ccagcagacccatctgcagcaatggtatccacaggaaccgccacaacagccacaccttcc
ctttcttcccttctggggacatctgggccctctctcttctcttctttggctacttcaact
gctgcagctgttgtgacgacaacaacaacagcagcagcaagtggactgtcattgagttcg
actacagcaggcacgggttttggaatgaagattttgccaagcagtgctgcaccaacagga
acattgcctaccagcacctctcttggtatgagaactccactttctggaaccacagttcag
gctaatgttgtcagttctgctgcagctgcaggagtcggtactgctgcaacaatgacttat
gctcagctagaaaatctgattaataagtggagtttggaattggaagatcaagaaaaacac
tttctgcaacaagcaactcaggtcaacgcatgggacagaactcttatgcagaatggagaa
cggatcaccactttacacagagaaatggaaaaagttaaactggaccagaaaaggttggat
caggaactggacttcatcttgtcacagcaaaaagaactggaggaccttctgactcctctg
gaggaatctgtgaaagagcagagcggaaccatttacctccagcatgcagatgaagagaga
gagaaaacgtacaagctggcagaaaacattgatgcccagctgaagcgcatggcccaggat
ctaaaggaggttatagagcatctgaacacatcagctgggccaggggatgctggaaacccg
ctccagcagatatgcaagattctcaatgcccacatggactctttacagtggattgatcag
aacagtgctcttcttcagaggaaggttgagcaggtaacaaaagagtgtgaaagccgaagg
aaggaacaggagcgtggattttccatagcatttgattaa
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