KEGG   Xenopus tropicalis (tropical clawed frog): 394959
Entry
394959            CDS       T01011                                 
Symbol
dus3l
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xtr03016]
    394959 (dus3l)
Enzymes [BR:xtr01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     394959 (dus3l)
Transfer RNA biogenesis [BR:xtr03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    394959 (dus3l)
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_9 FMN_dh
Other DBs
NCBI-GeneID: 394959
NCBI-ProteinID: NP_989334
Xenbase: XB-GENE-943237
UniProt: Q28BT8
LinkDB
Position
6:complement(30854680..30867946)
AA seq 639 aa
MAESDGSNNENGNLDTVTQKLDRGVAAIKPQYLTTKEKFHVFIDADGKEVVDKQTCSELS
GNDAENTVRAEDAAEPEAKRIKLDDGTGEGQDKPPTSAENKQEKKRARGQNKSRPHMKHS
QFEENKLCPSVTQECASKCFFGDKCKFLHDVAKYVSEKPEDIRPNCYLYETFGKCIYGVT
CRFAKSHLGDNFKNLINEELMKQWEGQVLVKNSLDKSLKEQLRKRKVVFEKTDKYLKLCN
KSGDSLKIKSPVVKEDNAAQVVQKDSPVTTVGAVTDEDLVKLRPCEKKTIDFRNKLYLAP
LTTCGNLPFRRLCKRFGADITCGEMAMCTNLLQGQPSEWALLKRHHSEDIFGVQLEGAFP
DTMTKCAELLNRTIDVDFVDINVGCPIDLVYKKGGGCGLMNRTNKFEQIVKGMNSVLDVP
LTVKIRTGVQEKINIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLADWEYIAQCADIASP
LPLFGNGDIISYEDANRALQTGVSGIMLARGALLKPWLFTEIKEQRHWDISSTERFDILK
DFTNYGLEHWGSDCQGVEKTRRFMLEWLSFLCRYIPIGLLEHVPQKINERPPYYMGRDYM
ETLMASQNVTDWIKISEMLLGPVPPNFSFLPKHKANSYK
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggcagaaagcgatggctctaataatgaaaatggcaatctggatactgtaactcaaaag
cttgaccgtggtgtagcagccattaaaccgcaatatctgaccaccaaggagaagtttcat
gttttcattgatgctgatggtaaggaagttgtagataagcaaacttgttcggagctgtct
ggtaatgatgcagagaacactgtccgtgctgaggatgcagcagaacctgaagcaaaaaga
attaagcttgatgatggcactggtgaaggacaggacaaaccccccacatctgcagagaac
aagcaagaaaaaaaaagagccagaggacaaaacaaaagccggccacacatgaaacattcc
cagtttgaagaaaacaaactgtgtccatcagttactcaggaatgcgccagtaaatgtttt
tttggagacaaatgcaagtttttgcatgatgttgccaaatatgtatccgaaaaaccagag
gacattcgcccaaattgttacctgtatgaaacttttgggaagtgcatttatggagtcaca
tgtcggtttgccaaatcgcacctgggcgacaatttcaagaatctaatcaatgaagagctt
atgaagcagtgggaaggacaagtgttagtgaaaaacagccttgacaaaagcttgaaagaa
caattacgaaaaaggaaagttgtgtttgagaagactgataaatatttaaagctttgtaat
aaatcaggcgatagtttgaaaattaaaagcccagtagttaaggaagacaatgctgcacaa
gttgtgcaaaaggacagtccagtgacgacagtcggggctgtgaccgatgaagatcttgta
aagctcaggccttgtgagaagaaaactattgatttcaggaacaagctttatctcgcacca
ctaactacgtgtggcaatctgccttttagaagactatgtaagcgttttggagcagatata
acatgtggagagatggccatgtgcaccaacctgcttcaggggcagccttctgagtgggct
ttgttaaagcgtcatcattcggaggatatttttggagtgcagctggagggagcatttcct
gacacaatgactaagtgtgctgagctgctcaacagaaccattgatgtggattttgtagat
atcaatgttggatgccccatagatttggtgtacaaaaagggtggtggctgtggcttaatg
aacaggactaacaaatttgaacagattgtgaaaggaatgaattctgttcttgatgttcca
ttgactgtaaaaatcaggactggggtgcaagaaaaaatcaacattgcccacaagcttatt
ccgaatctcagagactggggggtctcactggttacacttcatggaagatctagagaacaa
cgatatacaaaacttgcagactgggaatacatagctcaatgtgctgatattgcaagtcct
ctgcccctgtttggcaatggtgacatcatatcttatgaggatgcgaatcgagctttgcag
accggagtttcaggaatcatgttggcaagaggtgccttactcaagccatggctgtttact
gaaataaaagagcagaggcactgggatatttcctcaacagaacgttttgacatcttaaag
gactttacaaattatggcctggagcactggggttcagattgccagggggttgagaaaaca
agacgattcatgctggagtggttgtcctttttatgcaggtatattcccatcggtttactg
gagcatgtacctcagaagatcaatgaaagaccaccatattacatggggagagactacatg
gagactctaatggcaagtcagaatgtaactgactggataaaaataagtgagatgcttttg
ggacctgttcctccgaacttcagctttctgccgaagcacaaagccaactcttataaataa

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