Xenopus tropicalis (tropical clawed frog): 394968
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Entry
394968 CDS
T01011
Symbol
psmc6
Name
(RefSeq) 26S protease regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
394968 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xtr03051
]
394968 (psmc6)
Proteasome [BR:
xtr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
394968 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_5
AAA_22
PRS7_OB
RuvB_N
nSTAND3
AAA_14
Prot_ATP_ID_OB_N
DUF815
AAA_lid_PRS2_C
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
AAA_3
NPHP3_N
AAA_18
Mg_chelatase
Csa3_N
TPR_MLP1_2
bpMoxR
AAA_28
DUF5906
TsaE
AAA_24
DUF3829_2nd
NACHT
ATPase
AAA_25
Occludin_ELL
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
394968
NCBI-ProteinID:
NP_989342
Xenbase:
XB-GENE-978099
UniProt:
Q6P307
LinkDB
All DBs
Position
8:94537331..94549094
Genome browser
AA seq
389 aa
AA seq
DB search
MADPREKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADRD
FVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccacgggagaaggcgctgcaggattacaggaagaaattgctggagcacaag
gagatagatggccggctgaaggaattaagagaacaactgaaagagctcaccaaacagtat
gaaaaatcagagaatgaccttaaagcattgcagagcgttgggcagattgttggggaagtt
ctaaagcagcttactgaagaaaaattcattgttaaagcaacgaatggtccaagatatgtt
gttggttgtcgtcgacagcttgacaaaactaaattgaagcctggaacaagagttgcgcta
gatatgactactctgactataatgcgttatttaccacgagaagtggatccccttgtgtac
aacatgtctcatgaggaccctggaaatgtatcatactctgaaataggtggactttctgaa
cagatccgagaactcagagaggttattgagttgccacttacaaatccagaattgtttcag
cgtgtaggaattataccaccaaagggctgtcttctctatggccccccaggtactggaaaa
actcttcttgcaagagctgttgctagccaactggattgcaatttcctaaaggttgtgtct
agttcaattgtagacaagtacattggggaaagtgcacgactcattcgagaaatgtttaac
tatgccagggatcaccagccgtgtataatttttatggatgaaattgatgccattggtgga
cggcggttttctgaggggacctcagctgacagagagattcagagaactctaatggagttg
ctgaatcagatggatgggtttgatactttgcacagagtaaaaatgataatggctactaac
agacccgacactttggatccagccttgttgcgtcctggaagacttgacagaaaaatacat
attgagttgcccaatgagcaggcaaggttggatattttgaaaatccatgctggtcccata
acaaaacatggtgaaattgattatgaagccatagtaaagctttcagatggatttaatggg
gctgaccttagaaacgtctgcacagaagcagggatgtttgcaatccgagcagaccgtgac
tttgtggtccaggaagactttatgaaagctgttcgaaaagttgcagattctaagaaacta
gagtcgaaactagactacaaacctgtctaa
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