Xenopus tropicalis (tropical clawed frog): 394988
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Entry
394988 CDS
T01011
Symbol
psmc5
Name
(RefSeq) 26S protease regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
394988 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xtr03051
]
394988 (psmc5)
Proteasome [BR:
xtr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
394988 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
PRS7_OB
nSTAND3
RuvB_N
TIP49
AAA_28
AAA_18
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
PhoH
AAA_17
FapA
IstB_IS21
AAA_24
AAA_25
AAA_7
DUF815
Sigma54_activat
bpMoxR
ABC_tran
RNA_helicase
DUF5906
Zeta_toxin
AAA_11
AAA_19
TsaE
HR1
Motif
Other DBs
NCBI-GeneID:
394988
NCBI-ProteinID:
NP_989358
Xenbase:
XB-GENE-999928
UniProt:
Q6P380
LinkDB
All DBs
Position
10:15720550..15729918
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AA seq
414 aa
AA seq
DB search
MAPPGEYKVAGDGMEQMEMDESRGGIGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNEL
NAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNC
RVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP
ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR
ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI
MATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP
GASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggctccgccgggagaatacaaggtggcgggggacgggatggagcagatggagatggac
gagtcccgtggaggtattggcctgaggcagtattacttgtccaagattgaagatctacag
cttgttgttaatgacaagagtcagaatctcaggcgcctgcaagcacagaggaatgaactg
aacgctaaagtgaggctactgagggaggagctgcagctgcttcaagagcagggatcctac
gtaggagaagtggtcagagctatggacaagaagaaagtattggttaaggttcaccccgag
gggaaatttgttgtggatattgataaaaatattgatatcaatgatgtcacaccaaactgt
cgagtcgctctgcgcaatgacagttacacactgcataagatcctgcccaataaggttgat
cccttagtgtccttgatgatggtggagaaagtaccagactccacctatgagatgattggt
ggcttggataaacagatcaaggaaatcaaggaggtcattgaactgcctgtgaaacatccg
gagctctttgaagccttgggtatagcgcagcccaagggtgtgttgctgtacggacctcct
ggtactggaaagactcttttggctcgtgctgttgcccatcacacagactgcacatttata
cgagtctctggatctgaactggtgcagaagttcatcggagaaggtgctcgtatggtgcgt
gagttgttcgttatggcccgagaacacgctccctccattatctttatggatgaaattgat
tcgattgggtcctctcggctcgaggggggctcaggaggagacagtgaggttcagcgcact
atgcttgagctgcttaaccaactggatggatttgaggcaacaaagaacataaaggtaatc
atggcaactaacagaatcgatatattggactctgctctgctgcgcccaggtcgcattgac
aggaagatagagttcccacctcctaatgaagaggcccgtctggacatcctgaaaattcac
tcaagaaaaatgaacttgactcgtgggatcaacctgcgtaaaatagcagaactgatgcct
ggggcatcaggggctgaagtgaagggggtgtgcacagaggcggggatgtatgctcttcgc
gagaggagggtgcacgtcacacaagaagactttgaaatggctgtagcaaaggtgatgcag
aaagacagcgagaagaacatgtccattaagaagctgtggaagtga
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