Xenopus tropicalis (tropical clawed frog): 395029
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Entry
395029 CDS
T01011
Symbol
ythdf1
Name
(RefSeq) YTH domain-containing family protein 1
KO
K20102
YTH domain-containing family protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
395029 (ythdf1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
395029 (ythdf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
395029
NCBI-ProteinID:
NP_989392
Xenbase:
XB-GENE-5943530
UniProt:
Q6P1V5
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Position
10:2250084..2258897
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AA seq
565 aa
AA seq
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MSATSVDPQRPKGQDSKVQNGSLHQKDSVHDNDFEQYLSGQSNQSNSYPSMTDPYLSSYY
PPSIGFPYSLSEAPWSTGGDPPIPYLTPYGQLSNGDHHFMHDAVFGQPGGLGNNIYQHRF
NFFPENPAFSAWGTSGSQGQQTQNSAYGGSYSYPPSSLGGTIVDGQTGFHNETLNKAPGM
NSIEQGMVGLKIGSNVTASAVKTVGSVVNSVGMPSALSGNGGTSISMPPSKPTSWAAIAS
KPAKPQPKAKTKPVTIIGGALPPPPIKHNMDIGTWDNKGPVAKPPMPQQIPSPQSMPPPQ
PQLLQPIPAQPPPMSQTPYQNPPPPQQQPQAPQNRWVAPRNRNAAYGQGGGPDGNPLGGA
QSHSAPGNESHPVLEKLKAAHSYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCST
EHGNKRLDSAFRSMNGKGPVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKF
DVKWLFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKLVLKIIATYKHTTSIFD
DFSHYEKRQEEEEVVRKVMAKPDSC
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactagcgtggatccccagcgaccaaagggacaagacagtaaagttcaaaac
ggatccctgcaccagaaggacagcgtgcacgataatgacttcgagcagtacctgtcggga
cagtccaatcagagtaacagctacccttccatgaccgacccgtacctgtccagttactac
cctccttctatcggctttccgtattcgctcagcgaagctccttggtcaaccggcggggac
cccccgatcccgtacctcaccccgtacggacagctcagcaacggagaccaccatttcatg
cacgatgcggtctttgggcagcccggcggcctggggaataacatctatcagcaccggttc
aacttcttcccggaaaacccggccttttccgcatgggggacgagcggctcccaggggcag
cagacccagaactccgcctacgggggcagttacagttacccaccaagttccttgggcggg
accatagtggacggacagaccgggtttcacaatgaaactctgaacaaagcccccggtatg
aacagcattgagcagggcatggtgggccttaagatcgggagtaacgtcaccgcttccgcc
gtaaagacggtgggctctgtggttaacagcgtggggatgcccagcgctctgtccggcaat
ggcggcactagcataagcatgcccccctccaaacccacgtcctgggcggccatcgccagc
aaaccggccaagccgcagcccaaagcaaaaactaaaccagtcactataatcggaggggcc
ctcccacctcccccgatcaagcataacatggacataggtacttgggacaataaaggaccc
gtggctaagcccccgatgccgcaacaaatcccgtccccccagtccatgcctccgcctcaa
cctcagctgctgcagccaatcccggctcagcctccaccaatgtctcagactccgtaccaa
aacccaccgccccctcagcagcagccacaggcccctcagaaccgctgggtggccccacgg
aacaggaacgctgcttacggccagggcggaggcccggacgggaaccctctgggcggggct
cagtctcactccgcccctgggaacgagtcccaccccgtgctggagaaactgaaggccgcc
cacagctacaaccccaaggactttgactggaacctgaaaaacgggcgcgtgttcataata
aagagctactccgaggacgacatccaccgctccatcaagtactccatctggtgcagcaca
gagcacggcaacaagcgcctggatagcgccttccgctccatgaacggcaagggccccgtc
taccttctgttcagcgtcaacggcagcggacacttctgcggcgtggccgagatgaagtcc
cccgtggactacggcaccagtgcgggcgtctggtcgcaggacaagtggaagggcaagttc
gacgtcaagtggctcttcgtcaaggacgttcccaacaaccagctgaggcacatccgcctg
gagaacaacgacaacaaaccggtcacaaactcgcgcgacacgcaggaggtgcccttagaa
aaagcaaaactggtgctcaaaatcattgccacttacaagcacacgacctccatctttgat
gacttttctcattacgagaagcggcaggaagaggaagaggtcgtgcgcaaggtaatggct
aaacccgactcttgctag
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