Xenopus tropicalis (tropical clawed frog): 395031
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Entry
395031 CDS
T01011
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 precursor
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00510
N-Glycan biosynthesis
xtr00513
Various types of N-glycan biosynthesis
xtr01100
Metabolic pathways
xtr04141
Protein processing in endoplasmic reticulum
Module
xtr_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
395031 (rpn1)
00513 Various types of N-glycan biosynthesis
395031 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
395031 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
CT398_CC
FliD_C
XhlA
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
395031
NCBI-ProteinID:
NP_989394
Xenbase:
XB-GENE-999954
UniProt:
Q6P1S9
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Position
4:complement(135568280..135579006)
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AA seq
595 aa
AA seq
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MERSAGFFLCFIAAIAVSSRAQDLVNEDVKRTVDLSSHLAKVTAEVTISNPGPGAVHSFL
LALEPELGSRLAYLGVKGEDEEDGALEIQETKVKGKSGMQYTVRFGSSLAPGAKTKVTVE
TVFTHVLQPYPTQITQAEKQFVTFEGNHYFFSPYPTKSQTTRVKLASRNVETYTKLGNPT
RSEDLIEYGPFKDIAPWSQDLLKVHYENNSPFLTITSMTRLIEVSHWGNIAVEETVDLKH
TGAYLKGPFSRYDYQRQPDSGISSVKSFKTILPAAAQDVYYRDEIGNISTSHLLILDDSV
EMEIRPRFPLFGGWKTHYIIGYNLPSYEYLYNLGDQYALKMRFIDHVFDDQVVDSLTVKI
VLPEGAKNVHVDNPYDINRAPDELHYTYLDTFGRTVIVAHKNNLVEQHIQDIVVHYSFNK
ILMLQEPLLVVGAFYILFFTVILYVRLDFSITKDPAAEARMKAACITEQILTLVNKRLGL
YRHFDEAVNKYKLSRDIATLNSGKKTLETEHKNLTNEIASLQSKLKAEGSDLCDKVAEIQ
KLDSQVKEIVLKSSSEAERLVSGKLKKETYIENEKQHSSRRQELVNKIDNILVGL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctcagccggtttcttcctttgcttcatagcagccatcgctgtctcctccagg
gcgcaggacttggtgaatgaagatgtcaagcgcacagtggatctgagcagccatttagct
aaagtgacggcggaggttaccatttccaacccgggaccgggcgccgttcattcctttctc
ctggctctggagccggagctgggcagccgtctggcctaccttggggtgaaaggggaggat
gaagaagatggagcccttgaaatacaagagacaaaagtgaaaggcaaaagtggaatgcaa
tacacagtgcgttttggatcctctcttgcccccggagccaaaaccaaagtgactgttgag
accgtctttacacacgtgcttcagccctatcccacccagataacacaggctgagaagcag
tttgtcacttttgaagggaaccattatttcttctcaccttacccaaccaagtcccagacc
acacgcgtcaagctcgcctctaggaatgtggagacttacaccaagcttggaaaccctacc
agatccgaggacctcatagaatatggtccatttaaggatattgcaccttggagccaggac
ctcttaaaagttcactatgagaacaacagccctttcctaacaatcactagcatgacacgt
ttgattgaggtctcccactggggtaacattgctgtggaagagacggttgacttgaaacac
accggcgcatatctgaaagggcccttttctagatatgattaccagcgccagccagacagt
ggcatttcatcggtcaaatcctttaagactatacttcctgctgctgcccaagatgtttat
tacagggatgagattgggaacatttctacaagccatttgttaatcctcgatgactctgtg
gagatggagatccgtcccaggttcccactttttggtggatggaaaacccattatattatt
ggatataaccttccaagttatgagtatctttacaatcttggtgaccagtatgccttgaag
atgaggtttattgatcatgtgtttgatgaccaagttgtggattcactaactgttaagata
gtcttgccagaaggtgccaaaaacgtccatgtggataacccctatgatataaaccgtgcc
cctgatgagctgcactacacttacctggacacatttggccgaacagtcattgtagctcat
aagaacaatctggttgagcagcatatacaagacattgtggttcattactccttcaacaag
atcctaatgttgcaggaaccactgctggttgtgggagcattctacatcttgtttttcact
gtcattctctatgtgaggctggatttctccatcacgaaggatccagcagcagaggccagg
atgaaagctgcctgcatcactgagcagattctcactcttgtaaataagagacttggcctg
taccgtcactttgatgaagctgtcaataagtataagctgtctcgggatatagccacctta
aacagcggcaagaagacactagagaccgaacacaagaacctgaccaatgaaattgcttca
ttacagtccaaacttaaagctgaaggctctgatctgtgtgataaggtggcagaaattcag
aagctggactcccaggtgaaggagattgtgttgaaatcctcctctgaagccgaacgtctg
gtttctgggaaactgaaaaaggaaacttacattgagaacgagaagcagcactcaagccgg
aggcaggagctggtcaacaaaatagacaacattcttgttggcttgtaa
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