Xenopus tropicalis (tropical clawed frog): 395055
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Entry
395055 CDS
T01011
Symbol
cdx1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
395055 (cdx1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
395055 (cdx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF707
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
395055
NCBI-ProteinID:
NP_989416
Xenbase:
XB-GENE-485396
UniProt:
Q90X89
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All DBs
Position
3:complement(21131624..21149943)
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AA seq
262 aa
AA seq
DB search
MYVGYLLDKDNNMYPNPVRHPGLNLNPQNYVPAPPQYSDFPSYHHVPGINSDPHHGQPGG
TWSSYTPSREDWHPYGPGPGASSANPAQISFSPSDYNPVQPPGPGLLPPSLNSSVSPLSP
SAQRRNLYEWMRRTGVPTSTNSNGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKA
ELAASLALTERQVKIWFQNRRAKERKVNKKKMQQQSQQASTTTPTPPSVGTTAGMGGLCS
SSSSNSNLVSPSSMPIKEEYLS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggttatcttttggataaggacaacaacatgtaccccaatcctgtcaggcac
cctggccttaatttgaatcctcagaactatgtaccggcgccccctcagtattctgatttc
cccagctatcatcatgtccctgggattaacagtgatccacaccatggccagcctggtggc
acctggagctcttatacccccagcagagaagattggcacccctatggaccgggacctgga
gcttcatccgctaacccagcacagatctctttcagtccctctgattataaccctgttcag
cccccaggacctggacttctgcctccttctttaaattcctctgtttcccctctgtccccc
agcgcacaaaggcgcaatctctatgaatggatgaggcgcacaggggtccccaccagcacc
aacagcaatggtaagacaagaacaaaagacaagtatcgtgtggtttatacagaccaccag
cgccttgaattagaaaaggaattccattacagccgctatataaccatccgcagaaaggca
gaactggcagcttcactggcgctaacggaacggcaggtaaaaatttggttccaaaatcgt
agagcaaaagaaaggaaggttaacaagaaaaaaatgcagcagcaaagtcaacaggcctca
acaaccactccaaccccaccatcagtgggtacgactgctggaatgggagggctttgcagt
agcagcagcagcaacagcaatttggtatctccatcctcaatgcctatcaaggaagaatat
ctttcgtaa
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integrated database retrieval system
