Xenopus tropicalis (tropical clawed frog): 407873
Help
Entry
407873 CDS
T01011
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
407873 (sox2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
407873 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
407873
NCBI-ProteinID:
NP_998869
Xenbase:
XB-GENE-484553
UniProt:
Q6NVN0
LinkDB
All DBs
Position
5:complement(108035485..108037707)
Genome browser
AA seq
311 aa
AA seq
DB search
MYNMMETDLKPPAPQQASGGNSNSGSNNQSKNSPDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YTLPGGLLAPGANPMTSGVGASLGAGVNQRMDTYAHMNGWTNGGYGMMQEQLGYPQHPGL
SAHNAPQMQPMHRYDVSALQYNSMSSSQTYMNGSPTYSMSYSQQGAPGMSLGSMGSVVKS
ESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAQSRLHMSQHYQSASVAGT
AINGTLPLSHM
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgatctcaagccccccgccccccagcaggcttcggggggc
aactccaactcgggctccaacaaccagagtaagaacagcccggatcgagtcaagagaccc
atgaatgccttcatggtatggtccaggggccagaggagaaagatggctcaggagaacccc
aagatgcacaactcagagatcagcaagagactgggggctgagtggaagctgctctccgag
gccgagaaaagaccattcatcgacgaggccaagaggctgcgagctctgcacatgaaggag
catccggattataaatacaggcccaggaggaaaaccaaaaccctcatgaagaaggataag
tacactctgcctgggggcttgctggctcctggggccaaccccatgacttctggggtaggg
gccagtctgggggccggggtcaatcaaaggatggacacttatgcccatatgaacggctgg
accaacggggggtatggcatgatgcaagagcagctcggctacccccaacacccgggcctc
agcgctcacaacgcgccccagatgcagcccatgcaccgctacgatgtcagtgccctgcaa
tataactccatgagcagctcgcagacttacatgaacggctcgcctacctacagcatgtcc
tactcccaacaaggggccccgggcatgtccctgggatccatgggctctgtagtcaagtcg
gaatccagctccagtccacctgtagtcacctcttcttcccattcacgggctccatgccag
gcaggggacctccgggacatgatcagcatgtacctacctggggcagaagtgccagagccc
gcagcccaaagcagactgcacatgtcccaacactatcagagtgcctcagtagcgggcaca
gccatcaatggcacgctgcctctgtcgcacatgtga
DBGET
integrated database retrieval system
